Gene : Thecc1EG025633 T. cacao v1.1

Defline:  (1 of 1) PTHR31585//PTHR31585:SF2 - FAMILY NOT NAMED // FOLATE-BIOPTERIN TRANSPORTER 7-RELATED Genomic Order:  2270
Name:  ? Thecc1EG025633 Secondary Identifier:  ? PAC:27422516

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025633 0.5kb upstream 0.5kb upstream 4753 true scaffold_5: 33805185-33809937 Theobroma cacao
Thecc1EG025633 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33809438-33809937 Theobroma cacao
Thecc1EG025633 0.5kb downstream 0.5kb downstream 4753 true scaffold_5: 33804685-33809437 Theobroma cacao
Thecc1EG025633 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33804685-33805184 Theobroma cacao
Thecc1EG025633 1.0kb upstream 1.0kb upstream 5253 true scaffold_5: 33805185-33810437 Theobroma cacao
Thecc1EG025633 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33809438-33810437 Theobroma cacao
Thecc1EG025633 1.0kb downstream 1.0kb downstream 5253 true scaffold_5: 33804185-33809437 Theobroma cacao
Thecc1EG025633 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33804185-33805184 Theobroma cacao
Thecc1EG025633 2.0kb upstream 2.0kb upstream 6253 true scaffold_5: 33805185-33811437 Theobroma cacao
Thecc1EG025633 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33809438-33811437 Theobroma cacao
Thecc1EG025633 2.0kb downstream 2.0kb downstream 6253 true scaffold_5: 33803185-33809437 Theobroma cacao
Thecc1EG025633 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33803185-33805184 Theobroma cacao
Thecc1EG025633 5.0kb upstream 5.0kb upstream 9253 true scaffold_5: 33805185-33814437 Theobroma cacao
Thecc1EG025633 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33809438-33814437 Theobroma cacao
Thecc1EG025633 5.0kb downstream 5.0kb downstream 9253 true scaffold_5: 33800185-33809437 Theobroma cacao
Thecc1EG025633 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33800185-33805184 Theobroma cacao
Thecc1EG025633 10.0kb upstream 10.0kb upstream 14253 true scaffold_5: 33805185-33819437 Theobroma cacao
Thecc1EG025633 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33809438-33819437 Theobroma cacao
Thecc1EG025633 10.0kb downstream 10.0kb downstream 14253 true scaffold_5: 33795185-33809437 Theobroma cacao
Thecc1EG025633 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33795185-33805184 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832875 5264 Brassicales-Malvales View MSA
124346576 5266 SBM View MSA
124243182 5268 Malvidae View MSA
124061037 5270 Rosid View MSA
123738468 5271 Pentapetalae View MSA
122786741 5272 Eudicot View MSA
122049855 5273 Angiosperm View MSA
121350266 5274 Embryophyte View MSA
123425895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain