Gene : Thecc1EG025634 T. cacao v1.1
Defline:  (1 of 1) PTHR13718//PTHR13718:SF63 - RIBOSOMAL S SUBUNIT // SUBFAMILY NOT NAMED Genomic Order:  2271
Name:  ? Thecc1EG025634 Secondary Identifier:  ? PAC:27424516
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025634 0.5kb upstream 0.5kb upstream 8145 true scaffold_5: 33807789-33815933 Theobroma cacao
Thecc1EG025634 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33815434-33815933 Theobroma cacao
Thecc1EG025634 0.5kb downstream 0.5kb downstream 8145 true scaffold_5: 33807289-33815433 Theobroma cacao
Thecc1EG025634 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33807289-33807788 Theobroma cacao
Thecc1EG025634 1.0kb upstream 1.0kb upstream 8645 true scaffold_5: 33807789-33816433 Theobroma cacao
Thecc1EG025634 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33815434-33816433 Theobroma cacao
Thecc1EG025634 1.0kb downstream 1.0kb downstream 8645 true scaffold_5: 33806789-33815433 Theobroma cacao
Thecc1EG025634 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33806789-33807788 Theobroma cacao
Thecc1EG025634 2.0kb upstream 2.0kb upstream 9645 true scaffold_5: 33807789-33817433 Theobroma cacao
Thecc1EG025634 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33815434-33817433 Theobroma cacao
Thecc1EG025634 2.0kb downstream 2.0kb downstream 9645 true scaffold_5: 33805789-33815433 Theobroma cacao
Thecc1EG025634 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33805789-33807788 Theobroma cacao
Thecc1EG025634 5.0kb upstream 5.0kb upstream 12645 true scaffold_5: 33807789-33820433 Theobroma cacao
Thecc1EG025634 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33815434-33820433 Theobroma cacao
Thecc1EG025634 5.0kb downstream 5.0kb downstream 12645 true scaffold_5: 33802789-33815433 Theobroma cacao
Thecc1EG025634 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33802789-33807788 Theobroma cacao
Thecc1EG025634 10.0kb upstream 10.0kb upstream 17645 true scaffold_5: 33807789-33825433 Theobroma cacao
Thecc1EG025634 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33815434-33825433 Theobroma cacao
Thecc1EG025634 10.0kb downstream 10.0kb downstream 17645 true scaffold_5: 33797789-33815433 Theobroma cacao
Thecc1EG025634 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33797789-33807788 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834053 5264 Brassicales-Malvales View MSA
124342927 5266 SBM View MSA
124237635 5268 Malvidae View MSA
124063452 5270 Rosid View MSA
123741085 5271 Pentapetalae View MSA
122790036 5272 Eudicot View MSA
122044726 5273 Angiosperm View MSA
121349200 5274 Embryophyte View MSA
123426297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain