Gene : Pavir.2NG640300 P. virgatum v4.1
Defline:  (1 of 12) PTHR23024//PTHR23024:SF162 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  5707
Name:  ? Pavir.2NG640300 Secondary Identifier:  ? PAC:37585279
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6303 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG640300 0.5kb upstream 0.5kb upstream 2116 true Chr02N: 101505558-101507673 Panicum virgatum
Pavir.2NG640300 0.5kb upstream 0.5kb upstream 500 false Chr02N: 101507174-101507673 Panicum virgatum
Pavir.2NG640300 0.5kb downstream 0.5kb downstream 2116 true Chr02N: 101505058-101507173 Panicum virgatum
Pavir.2NG640300 0.5kb downstream 0.5kb downstream 500 false Chr02N: 101505058-101505557 Panicum virgatum
Pavir.2NG640300 1.0kb upstream 1.0kb upstream 2616 true Chr02N: 101505558-101508173 Panicum virgatum
Pavir.2NG640300 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 101507174-101508173 Panicum virgatum
Pavir.2NG640300 1.0kb downstream 1.0kb downstream 2616 true Chr02N: 101504558-101507173 Panicum virgatum
Pavir.2NG640300 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 101504558-101505557 Panicum virgatum
Pavir.2NG640300 2.0kb upstream 2.0kb upstream 3616 true Chr02N: 101505558-101509173 Panicum virgatum
Pavir.2NG640300 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 101507174-101509173 Panicum virgatum
Pavir.2NG640300 2.0kb downstream 2.0kb downstream 3616 true Chr02N: 101503558-101507173 Panicum virgatum
Pavir.2NG640300 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 101503558-101505557 Panicum virgatum
Pavir.2NG640300 5.0kb upstream 5.0kb upstream 6616 true Chr02N: 101505558-101512173 Panicum virgatum
Pavir.2NG640300 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 101507174-101512173 Panicum virgatum
Pavir.2NG640300 5.0kb downstream 5.0kb downstream 6616 true Chr02N: 101500558-101507173 Panicum virgatum
Pavir.2NG640300 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 101500558-101505557 Panicum virgatum
Pavir.2NG640300 10.0kb upstream 10.0kb upstream 11616 true Chr02N: 101505558-101517173 Panicum virgatum
Pavir.2NG640300 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 101507174-101517173 Panicum virgatum
Pavir.2NG640300 10.0kb downstream 10.0kb downstream 11616 true Chr02N: 101495558-101507173 Panicum virgatum
Pavir.2NG640300 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 101495558-101505557 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177119 5267 Panicoideae View MSA
124584166 5269 Grass View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain