Gene : Thecc1EG025561 T. cacao v1.1
Defline:  (1 of 10) PF08880 - QLQ (QLQ) Genomic Order:  2227
Name:  ? Thecc1EG025561 Secondary Identifier:  ? PAC:27421148
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025561 0.5kb upstream 0.5kb upstream 5802 true scaffold_5: 33459000-33464801 Theobroma cacao
Thecc1EG025561 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33464302-33464801 Theobroma cacao
Thecc1EG025561 0.5kb downstream 0.5kb downstream 5802 true scaffold_5: 33458500-33464301 Theobroma cacao
Thecc1EG025561 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33458500-33458999 Theobroma cacao
Thecc1EG025561 1.0kb upstream 1.0kb upstream 6302 true scaffold_5: 33459000-33465301 Theobroma cacao
Thecc1EG025561 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33464302-33465301 Theobroma cacao
Thecc1EG025561 1.0kb downstream 1.0kb downstream 6302 true scaffold_5: 33458000-33464301 Theobroma cacao
Thecc1EG025561 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33458000-33458999 Theobroma cacao
Thecc1EG025561 2.0kb upstream 2.0kb upstream 7302 true scaffold_5: 33459000-33466301 Theobroma cacao
Thecc1EG025561 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33464302-33466301 Theobroma cacao
Thecc1EG025561 2.0kb downstream 2.0kb downstream 7302 true scaffold_5: 33457000-33464301 Theobroma cacao
Thecc1EG025561 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33457000-33458999 Theobroma cacao
Thecc1EG025561 5.0kb upstream 5.0kb upstream 10302 true scaffold_5: 33459000-33469301 Theobroma cacao
Thecc1EG025561 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33464302-33469301 Theobroma cacao
Thecc1EG025561 5.0kb downstream 5.0kb downstream 10302 true scaffold_5: 33454000-33464301 Theobroma cacao
Thecc1EG025561 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33454000-33458999 Theobroma cacao
Thecc1EG025561 10.0kb upstream 10.0kb upstream 15302 true scaffold_5: 33459000-33474301 Theobroma cacao
Thecc1EG025561 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33464302-33474301 Theobroma cacao
Thecc1EG025561 10.0kb downstream 10.0kb downstream 15302 true scaffold_5: 33449000-33464301 Theobroma cacao
Thecc1EG025561 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33449000-33458999 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825772 5264 Brassicales-Malvales View MSA
124348986 5266 SBM View MSA
124246228 5268 Malvidae View MSA
124070464 5270 Rosid View MSA
123750721 5271 Pentapetalae View MSA
122795468 5272 Eudicot View MSA
122049590 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain