Gene : Pavir.9NG065300 P. virgatum v4.1
Defline:  (1 of 3) K04716 - sphingosine-1-phosphate phosphatase 1 (SGPP1) Genomic Order:  426
Name:  ? Pavir.9NG065300 Secondary Identifier:  ? PAC:37656553
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRIGLSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG065300 0.5kb upstream 0.5kb upstream 3666 true Chr09N: 4200108-4203773 Panicum virgatum
Pavir.9NG065300 0.5kb upstream 0.5kb upstream 500 false Chr09N: 4200108-4200607 Panicum virgatum
Pavir.9NG065300 0.5kb downstream 0.5kb downstream 3666 true Chr09N: 4200608-4204273 Panicum virgatum
Pavir.9NG065300 0.5kb downstream 0.5kb downstream 500 false Chr09N: 4203774-4204273 Panicum virgatum
Pavir.9NG065300 1.0kb upstream 1.0kb upstream 4166 true Chr09N: 4199608-4203773 Panicum virgatum
Pavir.9NG065300 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 4199608-4200607 Panicum virgatum
Pavir.9NG065300 1.0kb downstream 1.0kb downstream 4166 true Chr09N: 4200608-4204773 Panicum virgatum
Pavir.9NG065300 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 4203774-4204773 Panicum virgatum
Pavir.9NG065300 2.0kb upstream 2.0kb upstream 5166 true Chr09N: 4198608-4203773 Panicum virgatum
Pavir.9NG065300 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 4198608-4200607 Panicum virgatum
Pavir.9NG065300 2.0kb downstream 2.0kb downstream 5166 true Chr09N: 4200608-4205773 Panicum virgatum
Pavir.9NG065300 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 4203774-4205773 Panicum virgatum
Pavir.9NG065300 5.0kb upstream 5.0kb upstream 8166 true Chr09N: 4195608-4203773 Panicum virgatum
Pavir.9NG065300 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 4195608-4200607 Panicum virgatum
Pavir.9NG065300 5.0kb downstream 5.0kb downstream 8166 true Chr09N: 4200608-4208773 Panicum virgatum
Pavir.9NG065300 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 4203774-4208773 Panicum virgatum
Pavir.9NG065300 10.0kb upstream 10.0kb upstream 13166 true Chr09N: 4190608-4203773 Panicum virgatum
Pavir.9NG065300 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 4190608-4200607 Panicum virgatum
Pavir.9NG065300 10.0kb downstream 10.0kb downstream 13166 true Chr09N: 4200608-4213773 Panicum virgatum
Pavir.9NG065300 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 4203774-4213773 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197916 5267 Panicoideae View MSA
124580296 5269 Grass View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain