Gene : Thecc1EG025932 T. cacao v1.1

Defline:  (1 of 1) PTHR24078//PTHR24078:SF240 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  2504
Name:  ? Thecc1EG025932 Secondary Identifier:  ? PAC:27420905

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025932 0.5kb upstream 0.5kb upstream 6613 true scaffold_5: 35577210-35583822 Theobroma cacao
Thecc1EG025932 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35583323-35583822 Theobroma cacao
Thecc1EG025932 0.5kb downstream 0.5kb downstream 6613 true scaffold_5: 35576710-35583322 Theobroma cacao
Thecc1EG025932 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35576710-35577209 Theobroma cacao
Thecc1EG025932 1.0kb upstream 1.0kb upstream 7113 true scaffold_5: 35577210-35584322 Theobroma cacao
Thecc1EG025932 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35583323-35584322 Theobroma cacao
Thecc1EG025932 1.0kb downstream 1.0kb downstream 7113 true scaffold_5: 35576210-35583322 Theobroma cacao
Thecc1EG025932 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35576210-35577209 Theobroma cacao
Thecc1EG025932 2.0kb upstream 2.0kb upstream 8113 true scaffold_5: 35577210-35585322 Theobroma cacao
Thecc1EG025932 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35583323-35585322 Theobroma cacao
Thecc1EG025932 2.0kb downstream 2.0kb downstream 8113 true scaffold_5: 35575210-35583322 Theobroma cacao
Thecc1EG025932 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35575210-35577209 Theobroma cacao
Thecc1EG025932 5.0kb upstream 5.0kb upstream 11113 true scaffold_5: 35577210-35588322 Theobroma cacao
Thecc1EG025932 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35583323-35588322 Theobroma cacao
Thecc1EG025932 5.0kb downstream 5.0kb downstream 11113 true scaffold_5: 35572210-35583322 Theobroma cacao
Thecc1EG025932 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35572210-35577209 Theobroma cacao
Thecc1EG025932 10.0kb upstream 10.0kb upstream 16113 true scaffold_5: 35577210-35593322 Theobroma cacao
Thecc1EG025932 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35583323-35593322 Theobroma cacao
Thecc1EG025932 10.0kb downstream 10.0kb downstream 16113 true scaffold_5: 35567210-35583322 Theobroma cacao
Thecc1EG025932 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35567210-35577209 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838566 5264 Brassicales-Malvales View MSA
124337519 5266 SBM View MSA
124251082 5268 Malvidae View MSA
124073467 5270 Rosid View MSA
123743094 5271 Pentapetalae View MSA
122796940 5272 Eudicot View MSA
122050144 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain