Gene : Pavir.9NG033500 P. virgatum v4.1
Defline:  (1 of 3) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase Genomic Order:  317
Name:  ? Pavir.9NG033500 Secondary Identifier:  ? PAC:37651926
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG033500 0.5kb upstream 0.5kb upstream 2667 true Chr09N: 2682027-2684693 Panicum virgatum
Pavir.9NG033500 0.5kb upstream 0.5kb upstream 500 false Chr09N: 2684194-2684693 Panicum virgatum
Pavir.9NG033500 0.5kb downstream 0.5kb downstream 2667 true Chr09N: 2681527-2684193 Panicum virgatum
Pavir.9NG033500 0.5kb downstream 0.5kb downstream 500 false Chr09N: 2681527-2682026 Panicum virgatum
Pavir.9NG033500 1.0kb upstream 1.0kb upstream 3167 true Chr09N: 2682027-2685193 Panicum virgatum
Pavir.9NG033500 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 2684194-2685193 Panicum virgatum
Pavir.9NG033500 1.0kb downstream 1.0kb downstream 3167 true Chr09N: 2681027-2684193 Panicum virgatum
Pavir.9NG033500 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 2681027-2682026 Panicum virgatum
Pavir.9NG033500 2.0kb upstream 2.0kb upstream 4167 true Chr09N: 2682027-2686193 Panicum virgatum
Pavir.9NG033500 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 2684194-2686193 Panicum virgatum
Pavir.9NG033500 2.0kb downstream 2.0kb downstream 4167 true Chr09N: 2680027-2684193 Panicum virgatum
Pavir.9NG033500 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 2680027-2682026 Panicum virgatum
Pavir.9NG033500 5.0kb upstream 5.0kb upstream 7167 true Chr09N: 2682027-2689193 Panicum virgatum
Pavir.9NG033500 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 2684194-2689193 Panicum virgatum
Pavir.9NG033500 5.0kb downstream 5.0kb downstream 7167 true Chr09N: 2677027-2684193 Panicum virgatum
Pavir.9NG033500 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 2677027-2682026 Panicum virgatum
Pavir.9NG033500 10.0kb upstream 10.0kb upstream 12167 true Chr09N: 2682027-2694193 Panicum virgatum
Pavir.9NG033500 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 2684194-2694193 Panicum virgatum
Pavir.9NG033500 10.0kb downstream 10.0kb downstream 12167 true Chr09N: 2672027-2684193 Panicum virgatum
Pavir.9NG033500 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 2672027-2682026 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185982 5267 Panicoideae View MSA
124585151 5269 Grass View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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