Gene : Thecc1EG025921 T. cacao v1.1
Defline:  (1 of 1) PTHR11960:SF18 - 4EHP, ISOFORM B Genomic Order:  2493
Name:  ? Thecc1EG025921 Secondary Identifier:  ? PAC:27421782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025921 0.5kb upstream 0.5kb upstream 4315 true scaffold_5: 35509256-35513570 Theobroma cacao
Thecc1EG025921 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35513071-35513570 Theobroma cacao
Thecc1EG025921 0.5kb downstream 0.5kb downstream 4315 true scaffold_5: 35508756-35513070 Theobroma cacao
Thecc1EG025921 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35508756-35509255 Theobroma cacao
Thecc1EG025921 1.0kb upstream 1.0kb upstream 4815 true scaffold_5: 35509256-35514070 Theobroma cacao
Thecc1EG025921 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35513071-35514070 Theobroma cacao
Thecc1EG025921 1.0kb downstream 1.0kb downstream 4815 true scaffold_5: 35508256-35513070 Theobroma cacao
Thecc1EG025921 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35508256-35509255 Theobroma cacao
Thecc1EG025921 2.0kb upstream 2.0kb upstream 5815 true scaffold_5: 35509256-35515070 Theobroma cacao
Thecc1EG025921 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35513071-35515070 Theobroma cacao
Thecc1EG025921 2.0kb downstream 2.0kb downstream 5815 true scaffold_5: 35507256-35513070 Theobroma cacao
Thecc1EG025921 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35507256-35509255 Theobroma cacao
Thecc1EG025921 5.0kb upstream 5.0kb upstream 8815 true scaffold_5: 35509256-35518070 Theobroma cacao
Thecc1EG025921 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35513071-35518070 Theobroma cacao
Thecc1EG025921 5.0kb downstream 5.0kb downstream 8815 true scaffold_5: 35504256-35513070 Theobroma cacao
Thecc1EG025921 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35504256-35509255 Theobroma cacao
Thecc1EG025921 10.0kb upstream 10.0kb upstream 13815 true scaffold_5: 35509256-35523070 Theobroma cacao
Thecc1EG025921 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35513071-35523070 Theobroma cacao
Thecc1EG025921 10.0kb downstream 10.0kb downstream 13815 true scaffold_5: 35499256-35513070 Theobroma cacao
Thecc1EG025921 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35499256-35509255 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820489 5264 Brassicales-Malvales Singleton cluster - no MSA
124316702 5266 SBM Singleton cluster - no MSA
124165504 5268 Malvidae Singleton cluster - no MSA
123889180 5270 Rosid Singleton cluster - no MSA
123751569 5271 Pentapetalae View MSA
122785682 5272 Eudicot View MSA
122047051 5273 Angiosperm View MSA
121344049 5274 Embryophyte View MSA
123379965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain