Gene : Thecc1EG025924 T. cacao v1.1
Defline:  (1 of 1) PTHR33646//PTHR33646:SF2 - FAMILY NOT NAMED // F20H23.8 PROTEIN-RELATED Genomic Order:  2496
Name:  ? Thecc1EG025924 Secondary Identifier:  ? PAC:27423504
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025924 0.5kb upstream 0.5kb upstream 3040 true scaffold_5: 35521920-35524959 Theobroma cacao
Thecc1EG025924 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35521920-35522419 Theobroma cacao
Thecc1EG025924 0.5kb downstream 0.5kb downstream 3040 true scaffold_5: 35522420-35525459 Theobroma cacao
Thecc1EG025924 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35524960-35525459 Theobroma cacao
Thecc1EG025924 1.0kb upstream 1.0kb upstream 3540 true scaffold_5: 35521420-35524959 Theobroma cacao
Thecc1EG025924 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35521420-35522419 Theobroma cacao
Thecc1EG025924 1.0kb downstream 1.0kb downstream 3540 true scaffold_5: 35522420-35525959 Theobroma cacao
Thecc1EG025924 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35524960-35525959 Theobroma cacao
Thecc1EG025924 2.0kb upstream 2.0kb upstream 4540 true scaffold_5: 35520420-35524959 Theobroma cacao
Thecc1EG025924 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35520420-35522419 Theobroma cacao
Thecc1EG025924 2.0kb downstream 2.0kb downstream 4540 true scaffold_5: 35522420-35526959 Theobroma cacao
Thecc1EG025924 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35524960-35526959 Theobroma cacao
Thecc1EG025924 5.0kb upstream 5.0kb upstream 7540 true scaffold_5: 35517420-35524959 Theobroma cacao
Thecc1EG025924 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35517420-35522419 Theobroma cacao
Thecc1EG025924 5.0kb downstream 5.0kb downstream 7540 true scaffold_5: 35522420-35529959 Theobroma cacao
Thecc1EG025924 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35524960-35529959 Theobroma cacao
Thecc1EG025924 10.0kb upstream 10.0kb upstream 12540 true scaffold_5: 35512420-35524959 Theobroma cacao
Thecc1EG025924 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35512420-35522419 Theobroma cacao
Thecc1EG025924 10.0kb downstream 10.0kb downstream 12540 true scaffold_5: 35522420-35534959 Theobroma cacao
Thecc1EG025924 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35524960-35534959 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837615 5264 Brassicales-Malvales View MSA
124339499 5266 SBM View MSA
124251286 5268 Malvidae View MSA
124064474 5270 Rosid View MSA
123748778 5271 Pentapetalae View MSA
122792798 5272 Eudicot View MSA
122044291 5273 Angiosperm View MSA
121310268 5274 Embryophyte View MSA
123347804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain