Gene : Thecc1EG025906 T. cacao v1.1
Defline:  (1 of 4) PTHR11062//PTHR11062:SF95 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  2481
Name:  ? Thecc1EG025906 Secondary Identifier:  ? PAC:27421004
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025906 0.5kb upstream 0.5kb upstream 4434 true scaffold_5: 35402031-35406464 Theobroma cacao
Thecc1EG025906 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35405965-35406464 Theobroma cacao
Thecc1EG025906 0.5kb downstream 0.5kb downstream 4434 true scaffold_5: 35401531-35405964 Theobroma cacao
Thecc1EG025906 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35401531-35402030 Theobroma cacao
Thecc1EG025906 1.0kb upstream 1.0kb upstream 4934 true scaffold_5: 35402031-35406964 Theobroma cacao
Thecc1EG025906 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35405965-35406964 Theobroma cacao
Thecc1EG025906 1.0kb downstream 1.0kb downstream 4934 true scaffold_5: 35401031-35405964 Theobroma cacao
Thecc1EG025906 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35401031-35402030 Theobroma cacao
Thecc1EG025906 2.0kb upstream 2.0kb upstream 5934 true scaffold_5: 35402031-35407964 Theobroma cacao
Thecc1EG025906 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35405965-35407964 Theobroma cacao
Thecc1EG025906 2.0kb downstream 2.0kb downstream 5934 true scaffold_5: 35400031-35405964 Theobroma cacao
Thecc1EG025906 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35400031-35402030 Theobroma cacao
Thecc1EG025906 5.0kb upstream 5.0kb upstream 8934 true scaffold_5: 35402031-35410964 Theobroma cacao
Thecc1EG025906 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35405965-35410964 Theobroma cacao
Thecc1EG025906 5.0kb downstream 5.0kb downstream 8934 true scaffold_5: 35397031-35405964 Theobroma cacao
Thecc1EG025906 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35397031-35402030 Theobroma cacao
Thecc1EG025906 10.0kb upstream 10.0kb upstream 13934 true scaffold_5: 35402031-35415964 Theobroma cacao
Thecc1EG025906 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35405965-35415964 Theobroma cacao
Thecc1EG025906 10.0kb downstream 10.0kb downstream 13934 true scaffold_5: 35392031-35405964 Theobroma cacao
Thecc1EG025906 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35392031-35402030 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824042 5264 Brassicales-Malvales View MSA
124348572 5266 SBM View MSA
124254213 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain