Gene : Thecc1EG025894 T. cacao v1.1
Defline:  (1 of 1) PTHR10024//PTHR10024:SF182 - SYNAPTOTAGMIN // C2 CALCIUM/LIPID-BINDING AND PHOSPHORIBOSYLTRANSFERASE C-TERMINAL DOMAIN-CONTAINING PROTEIN Genomic Order:  2472
Name:  ? Thecc1EG025894 Secondary Identifier:  ? PAC:27422841
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025894 0.5kb upstream 0.5kb upstream 4715 true scaffold_5: 35350693-35355407 Theobroma cacao
Thecc1EG025894 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35350693-35351192 Theobroma cacao
Thecc1EG025894 0.5kb downstream 0.5kb downstream 4715 true scaffold_5: 35351193-35355907 Theobroma cacao
Thecc1EG025894 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35355408-35355907 Theobroma cacao
Thecc1EG025894 1.0kb upstream 1.0kb upstream 5215 true scaffold_5: 35350193-35355407 Theobroma cacao
Thecc1EG025894 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35350193-35351192 Theobroma cacao
Thecc1EG025894 1.0kb downstream 1.0kb downstream 5215 true scaffold_5: 35351193-35356407 Theobroma cacao
Thecc1EG025894 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35355408-35356407 Theobroma cacao
Thecc1EG025894 2.0kb upstream 2.0kb upstream 6215 true scaffold_5: 35349193-35355407 Theobroma cacao
Thecc1EG025894 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35349193-35351192 Theobroma cacao
Thecc1EG025894 2.0kb downstream 2.0kb downstream 6215 true scaffold_5: 35351193-35357407 Theobroma cacao
Thecc1EG025894 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35355408-35357407 Theobroma cacao
Thecc1EG025894 5.0kb upstream 5.0kb upstream 9215 true scaffold_5: 35346193-35355407 Theobroma cacao
Thecc1EG025894 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35346193-35351192 Theobroma cacao
Thecc1EG025894 5.0kb downstream 5.0kb downstream 9215 true scaffold_5: 35351193-35360407 Theobroma cacao
Thecc1EG025894 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35355408-35360407 Theobroma cacao
Thecc1EG025894 10.0kb upstream 10.0kb upstream 14215 true scaffold_5: 35341193-35355407 Theobroma cacao
Thecc1EG025894 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35341193-35351192 Theobroma cacao
Thecc1EG025894 10.0kb downstream 10.0kb downstream 14215 true scaffold_5: 35351193-35365407 Theobroma cacao
Thecc1EG025894 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35355408-35365407 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837585 5264 Brassicales-Malvales View MSA
124346063 5266 SBM View MSA
124241768 5268 Malvidae View MSA
124062380 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain