Gene : Pavir.9NG109800 P. virgatum v4.1
Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  1028
Name:  ? Pavir.9NG109800 Secondary Identifier:  ? PAC:37650461
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum GLYSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-2161 Panicum virgatum pathologic  
Pvirgatum PWY-3841 Panicum virgatum pathologic  
Pvirgatum SER-GLYSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG109800 0.5kb upstream 0.5kb upstream 5126 true Chr09N: 10499130-10504255 Panicum virgatum
Pavir.9NG109800 0.5kb upstream 0.5kb upstream 500 false Chr09N: 10503756-10504255 Panicum virgatum
Pavir.9NG109800 0.5kb downstream 0.5kb downstream 5126 true Chr09N: 10498630-10503755 Panicum virgatum
Pavir.9NG109800 0.5kb downstream 0.5kb downstream 500 false Chr09N: 10498630-10499129 Panicum virgatum
Pavir.9NG109800 1.0kb upstream 1.0kb upstream 5626 true Chr09N: 10499130-10504755 Panicum virgatum
Pavir.9NG109800 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 10503756-10504755 Panicum virgatum
Pavir.9NG109800 1.0kb downstream 1.0kb downstream 5626 true Chr09N: 10498130-10503755 Panicum virgatum
Pavir.9NG109800 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 10498130-10499129 Panicum virgatum
Pavir.9NG109800 2.0kb upstream 2.0kb upstream 6626 true Chr09N: 10499130-10505755 Panicum virgatum
Pavir.9NG109800 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 10503756-10505755 Panicum virgatum
Pavir.9NG109800 2.0kb downstream 2.0kb downstream 6626 true Chr09N: 10497130-10503755 Panicum virgatum
Pavir.9NG109800 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 10497130-10499129 Panicum virgatum
Pavir.9NG109800 5.0kb upstream 5.0kb upstream 9626 true Chr09N: 10499130-10508755 Panicum virgatum
Pavir.9NG109800 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 10503756-10508755 Panicum virgatum
Pavir.9NG109800 5.0kb downstream 5.0kb downstream 9626 true Chr09N: 10494130-10503755 Panicum virgatum
Pavir.9NG109800 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 10494130-10499129 Panicum virgatum
Pavir.9NG109800 10.0kb upstream 10.0kb upstream 14626 true Chr09N: 10499130-10513755 Panicum virgatum
Pavir.9NG109800 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 10503756-10513755 Panicum virgatum
Pavir.9NG109800 10.0kb downstream 10.0kb downstream 14626 true Chr09N: 10489130-10503755 Panicum virgatum
Pavir.9NG109800 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 10489130-10499129 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187926 5267 Panicoideae View MSA
124570013 5269 Grass View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain