Gene : Thecc1EG025877 T. cacao v1.1
Defline:  (1 of 13) 2.1.1.68 - Caffeate O-methyltransferase Genomic Order:  2458
Name:  ? Thecc1EG025877 Secondary Identifier:  ? PAC:27424977
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-2181 Theobroma cacao pathologic  
Tcacao PWY-361 Theobroma cacao pathologic  
Tcacao PWY-7186 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025877 0.5kb upstream 0.5kb upstream 5097 true scaffold_5: 35271896-35276992 Theobroma cacao
Thecc1EG025877 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35271896-35272395 Theobroma cacao
Thecc1EG025877 0.5kb downstream 0.5kb downstream 5097 true scaffold_5: 35272396-35277492 Theobroma cacao
Thecc1EG025877 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35276993-35277492 Theobroma cacao
Thecc1EG025877 1.0kb upstream 1.0kb upstream 5597 true scaffold_5: 35271396-35276992 Theobroma cacao
Thecc1EG025877 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35271396-35272395 Theobroma cacao
Thecc1EG025877 1.0kb downstream 1.0kb downstream 5597 true scaffold_5: 35272396-35277992 Theobroma cacao
Thecc1EG025877 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35276993-35277992 Theobroma cacao
Thecc1EG025877 2.0kb upstream 2.0kb upstream 6597 true scaffold_5: 35270396-35276992 Theobroma cacao
Thecc1EG025877 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35270396-35272395 Theobroma cacao
Thecc1EG025877 2.0kb downstream 2.0kb downstream 6597 true scaffold_5: 35272396-35278992 Theobroma cacao
Thecc1EG025877 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35276993-35278992 Theobroma cacao
Thecc1EG025877 5.0kb upstream 5.0kb upstream 9597 true scaffold_5: 35267396-35276992 Theobroma cacao
Thecc1EG025877 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35267396-35272395 Theobroma cacao
Thecc1EG025877 5.0kb downstream 5.0kb downstream 9597 true scaffold_5: 35272396-35281992 Theobroma cacao
Thecc1EG025877 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35276993-35281992 Theobroma cacao
Thecc1EG025877 10.0kb upstream 10.0kb upstream 14597 true scaffold_5: 35262396-35276992 Theobroma cacao
Thecc1EG025877 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35262396-35272395 Theobroma cacao
Thecc1EG025877 10.0kb downstream 10.0kb downstream 14597 true scaffold_5: 35272396-35286992 Theobroma cacao
Thecc1EG025877 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35276993-35286992 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842068 5264 Brassicales-Malvales View MSA
124347226 5266 SBM View MSA
124247005 5268 Malvidae View MSA
124065295 5270 Rosid View MSA
123739758 5271 Pentapetalae View MSA
122791331 5272 Eudicot View MSA
122042178 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain