Gene : Pavir.9NG099900 P. virgatum v4.1
Defline:  (1 of 3) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  934
Name:  ? Pavir.9NG099900 Secondary Identifier:  ? PAC:37656769
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG099900 0.5kb upstream 0.5kb upstream 3823 true Chr09N: 9868001-9871823 Panicum virgatum
Pavir.9NG099900 0.5kb upstream 0.5kb upstream 500 false Chr09N: 9868001-9868500 Panicum virgatum
Pavir.9NG099900 0.5kb downstream 0.5kb downstream 3823 true Chr09N: 9868501-9872323 Panicum virgatum
Pavir.9NG099900 0.5kb downstream 0.5kb downstream 500 false Chr09N: 9871824-9872323 Panicum virgatum
Pavir.9NG099900 1.0kb upstream 1.0kb upstream 4323 true Chr09N: 9867501-9871823 Panicum virgatum
Pavir.9NG099900 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 9867501-9868500 Panicum virgatum
Pavir.9NG099900 1.0kb downstream 1.0kb downstream 4323 true Chr09N: 9868501-9872823 Panicum virgatum
Pavir.9NG099900 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 9871824-9872823 Panicum virgatum
Pavir.9NG099900 2.0kb upstream 2.0kb upstream 5323 true Chr09N: 9866501-9871823 Panicum virgatum
Pavir.9NG099900 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 9866501-9868500 Panicum virgatum
Pavir.9NG099900 2.0kb downstream 2.0kb downstream 5323 true Chr09N: 9868501-9873823 Panicum virgatum
Pavir.9NG099900 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 9871824-9873823 Panicum virgatum
Pavir.9NG099900 5.0kb upstream 5.0kb upstream 8323 true Chr09N: 9863501-9871823 Panicum virgatum
Pavir.9NG099900 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 9863501-9868500 Panicum virgatum
Pavir.9NG099900 5.0kb downstream 5.0kb downstream 8323 true Chr09N: 9868501-9876823 Panicum virgatum
Pavir.9NG099900 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 9871824-9876823 Panicum virgatum
Pavir.9NG099900 10.0kb upstream 10.0kb upstream 13323 true Chr09N: 9858501-9871823 Panicum virgatum
Pavir.9NG099900 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 9858501-9868500 Panicum virgatum
Pavir.9NG099900 10.0kb downstream 10.0kb downstream 13323 true Chr09N: 9868501-9881823 Panicum virgatum
Pavir.9NG099900 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 9871824-9881823 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184498 5267 Panicoideae View MSA
124570894 5269 Grass View MSA
122046706 5273 Angiosperm View MSA
121343893 5274 Embryophyte View MSA
123425417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain