Gene : Pavir.9NG136300 P. virgatum v4.1
Defline:  (1 of 4) K01869 - leucyl-tRNA synthetase (LARS, leuS) Genomic Order:  1264
Name:  ? Pavir.9NG136300 Secondary Identifier:  ? PAC:37651908
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG136300 0.5kb upstream 0.5kb upstream 7696 true Chr09N: 13097352-13105047 Panicum virgatum
Pavir.9NG136300 0.5kb upstream 0.5kb upstream 500 false Chr09N: 13097352-13097851 Panicum virgatum
Pavir.9NG136300 0.5kb downstream 0.5kb downstream 7696 true Chr09N: 13097852-13105547 Panicum virgatum
Pavir.9NG136300 0.5kb downstream 0.5kb downstream 500 false Chr09N: 13105048-13105547 Panicum virgatum
Pavir.9NG136300 1.0kb upstream 1.0kb upstream 8196 true Chr09N: 13096852-13105047 Panicum virgatum
Pavir.9NG136300 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 13096852-13097851 Panicum virgatum
Pavir.9NG136300 1.0kb downstream 1.0kb downstream 8196 true Chr09N: 13097852-13106047 Panicum virgatum
Pavir.9NG136300 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 13105048-13106047 Panicum virgatum
Pavir.9NG136300 2.0kb upstream 2.0kb upstream 9196 true Chr09N: 13095852-13105047 Panicum virgatum
Pavir.9NG136300 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 13095852-13097851 Panicum virgatum
Pavir.9NG136300 2.0kb downstream 2.0kb downstream 9196 true Chr09N: 13097852-13107047 Panicum virgatum
Pavir.9NG136300 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 13105048-13107047 Panicum virgatum
Pavir.9NG136300 5.0kb upstream 5.0kb upstream 12196 true Chr09N: 13092852-13105047 Panicum virgatum
Pavir.9NG136300 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 13092852-13097851 Panicum virgatum
Pavir.9NG136300 5.0kb downstream 5.0kb downstream 12196 true Chr09N: 13097852-13110047 Panicum virgatum
Pavir.9NG136300 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 13105048-13110047 Panicum virgatum
Pavir.9NG136300 10.0kb upstream 10.0kb upstream 17196 true Chr09N: 13087852-13105047 Panicum virgatum
Pavir.9NG136300 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 13087852-13097851 Panicum virgatum
Pavir.9NG136300 10.0kb downstream 10.0kb downstream 17196 true Chr09N: 13097852-13115047 Panicum virgatum
Pavir.9NG136300 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 13105048-13115047 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195247 5267 Panicoideae View MSA
124584532 5269 Grass View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain