Gene : Pavir.9NG137700 P. virgatum v4.1
Defline:  (1 of 2) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  1278
Name:  ? Pavir.9NG137700 Secondary Identifier:  ? PAC:37655517
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-3781 Panicum virgatum pathologic  
Pvirgatum PWY-4302 Panicum virgatum pathologic  
Pvirgatum PWY-5083 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG137700 0.5kb upstream 0.5kb upstream 4387 true Chr09N: 13168016-13172402 Panicum virgatum
Pavir.9NG137700 0.5kb upstream 0.5kb upstream 500 false Chr09N: 13168016-13168515 Panicum virgatum
Pavir.9NG137700 0.5kb downstream 0.5kb downstream 4387 true Chr09N: 13168516-13172902 Panicum virgatum
Pavir.9NG137700 0.5kb downstream 0.5kb downstream 500 false Chr09N: 13172403-13172902 Panicum virgatum
Pavir.9NG137700 1.0kb upstream 1.0kb upstream 4887 true Chr09N: 13167516-13172402 Panicum virgatum
Pavir.9NG137700 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 13167516-13168515 Panicum virgatum
Pavir.9NG137700 1.0kb downstream 1.0kb downstream 4887 true Chr09N: 13168516-13173402 Panicum virgatum
Pavir.9NG137700 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 13172403-13173402 Panicum virgatum
Pavir.9NG137700 2.0kb upstream 2.0kb upstream 5887 true Chr09N: 13166516-13172402 Panicum virgatum
Pavir.9NG137700 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 13166516-13168515 Panicum virgatum
Pavir.9NG137700 2.0kb downstream 2.0kb downstream 5887 true Chr09N: 13168516-13174402 Panicum virgatum
Pavir.9NG137700 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 13172403-13174402 Panicum virgatum
Pavir.9NG137700 5.0kb upstream 5.0kb upstream 8887 true Chr09N: 13163516-13172402 Panicum virgatum
Pavir.9NG137700 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 13163516-13168515 Panicum virgatum
Pavir.9NG137700 5.0kb downstream 5.0kb downstream 8887 true Chr09N: 13168516-13177402 Panicum virgatum
Pavir.9NG137700 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 13172403-13177402 Panicum virgatum
Pavir.9NG137700 10.0kb upstream 10.0kb upstream 13887 true Chr09N: 13158516-13172402 Panicum virgatum
Pavir.9NG137700 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 13158516-13168515 Panicum virgatum
Pavir.9NG137700 10.0kb downstream 10.0kb downstream 13887 true Chr09N: 13168516-13182402 Panicum virgatum
Pavir.9NG137700 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 13172403-13182402 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122100846 5267 Panicoideae Singleton cluster - no MSA
124397471 5269 Grass Singleton cluster - no MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain