Gene : Pavir.9NG131000 P. virgatum v4.1
Defline:  (1 of 5) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  1218
Name:  ? Pavir.9NG131000 Secondary Identifier:  ? PAC:37655111
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG131000 0.5kb upstream 0.5kb upstream 7621 true Chr09N: 12565229-12572849 Panicum virgatum
Pavir.9NG131000 0.5kb upstream 0.5kb upstream 500 false Chr09N: 12572350-12572849 Panicum virgatum
Pavir.9NG131000 0.5kb downstream 0.5kb downstream 7621 true Chr09N: 12564729-12572349 Panicum virgatum
Pavir.9NG131000 0.5kb downstream 0.5kb downstream 500 false Chr09N: 12564729-12565228 Panicum virgatum
Pavir.9NG131000 1.0kb upstream 1.0kb upstream 8121 true Chr09N: 12565229-12573349 Panicum virgatum
Pavir.9NG131000 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 12572350-12573349 Panicum virgatum
Pavir.9NG131000 1.0kb downstream 1.0kb downstream 8121 true Chr09N: 12564229-12572349 Panicum virgatum
Pavir.9NG131000 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 12564229-12565228 Panicum virgatum
Pavir.9NG131000 2.0kb upstream 2.0kb upstream 9121 true Chr09N: 12565229-12574349 Panicum virgatum
Pavir.9NG131000 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 12572350-12574349 Panicum virgatum
Pavir.9NG131000 2.0kb downstream 2.0kb downstream 9121 true Chr09N: 12563229-12572349 Panicum virgatum
Pavir.9NG131000 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 12563229-12565228 Panicum virgatum
Pavir.9NG131000 5.0kb upstream 5.0kb upstream 12121 true Chr09N: 12565229-12577349 Panicum virgatum
Pavir.9NG131000 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 12572350-12577349 Panicum virgatum
Pavir.9NG131000 5.0kb downstream 5.0kb downstream 12121 true Chr09N: 12560229-12572349 Panicum virgatum
Pavir.9NG131000 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 12560229-12565228 Panicum virgatum
Pavir.9NG131000 10.0kb upstream 10.0kb upstream 17121 true Chr09N: 12565229-12582349 Panicum virgatum
Pavir.9NG131000 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 12572350-12582349 Panicum virgatum
Pavir.9NG131000 10.0kb downstream 10.0kb downstream 17121 true Chr09N: 12555229-12572349 Panicum virgatum
Pavir.9NG131000 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 12555229-12565228 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191584 5267 Panicoideae View MSA
124590006 5269 Grass View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain