Gene : Thecc1EG025841 T. cacao v1.1
Defline:  Uncharacterized protein (42%P) Genomic Order:  2430
Name:  ? Thecc1EG025841 Secondary Identifier:  ? PAC:27423880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025841 0.5kb upstream 0.5kb upstream 9766 true scaffold_5: 35071128-35080893 Theobroma cacao
Thecc1EG025841 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35080394-35080893 Theobroma cacao
Thecc1EG025841 0.5kb downstream 0.5kb downstream 9766 true scaffold_5: 35070628-35080393 Theobroma cacao
Thecc1EG025841 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35070628-35071127 Theobroma cacao
Thecc1EG025841 1.0kb upstream 1.0kb upstream 10266 true scaffold_5: 35071128-35081393 Theobroma cacao
Thecc1EG025841 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35080394-35081393 Theobroma cacao
Thecc1EG025841 1.0kb downstream 1.0kb downstream 10266 true scaffold_5: 35070128-35080393 Theobroma cacao
Thecc1EG025841 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35070128-35071127 Theobroma cacao
Thecc1EG025841 2.0kb upstream 2.0kb upstream 11266 true scaffold_5: 35071128-35082393 Theobroma cacao
Thecc1EG025841 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35080394-35082393 Theobroma cacao
Thecc1EG025841 2.0kb downstream 2.0kb downstream 11266 true scaffold_5: 35069128-35080393 Theobroma cacao
Thecc1EG025841 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35069128-35071127 Theobroma cacao
Thecc1EG025841 5.0kb upstream 5.0kb upstream 14266 true scaffold_5: 35071128-35085393 Theobroma cacao
Thecc1EG025841 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35080394-35085393 Theobroma cacao
Thecc1EG025841 5.0kb downstream 5.0kb downstream 14266 true scaffold_5: 35066128-35080393 Theobroma cacao
Thecc1EG025841 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35066128-35071127 Theobroma cacao
Thecc1EG025841 10.0kb upstream 10.0kb upstream 19266 true scaffold_5: 35071128-35090393 Theobroma cacao
Thecc1EG025841 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35080394-35090393 Theobroma cacao
Thecc1EG025841 10.0kb downstream 10.0kb downstream 19266 true scaffold_5: 35061128-35080393 Theobroma cacao
Thecc1EG025841 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35061128-35071127 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791839 5273 Angiosperm View MSA
123820108 5264 Brassicales-Malvales Singleton cluster - no MSA
124316330 5266 SBM Singleton cluster - no MSA
124249091 5268 Malvidae View MSA
123952321 5270 Rosid View MSA
123751558 5271 Pentapetalae View MSA
122794555 5272 Eudicot View MSA
121063123 5274 Embryophyte View MSA
123102905 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain