Gene : Thecc1EG025800 T. cacao v1.1
Defline:  (1 of 1) PTHR10992:SF217 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  2402
Name:  ? Thecc1EG025800 Secondary Identifier:  ? PAC:27422617
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1319 Theobroma cacao pathologic  
Tcacao PWY4FS-7 Theobroma cacao pathologic  
Tcacao PWY-7411 Theobroma cacao pathologic  
Tcacao PWY-7417 Theobroma cacao pathologic  
Tcacao TRIGLSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025800 0.5kb upstream 0.5kb upstream 3280 true scaffold_5: 34766388-34769667 Theobroma cacao
Thecc1EG025800 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34769168-34769667 Theobroma cacao
Thecc1EG025800 0.5kb downstream 0.5kb downstream 3280 true scaffold_5: 34765888-34769167 Theobroma cacao
Thecc1EG025800 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34765888-34766387 Theobroma cacao
Thecc1EG025800 1.0kb upstream 1.0kb upstream 3780 true scaffold_5: 34766388-34770167 Theobroma cacao
Thecc1EG025800 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34769168-34770167 Theobroma cacao
Thecc1EG025800 1.0kb downstream 1.0kb downstream 3780 true scaffold_5: 34765388-34769167 Theobroma cacao
Thecc1EG025800 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34765388-34766387 Theobroma cacao
Thecc1EG025800 2.0kb upstream 2.0kb upstream 4780 true scaffold_5: 34766388-34771167 Theobroma cacao
Thecc1EG025800 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34769168-34771167 Theobroma cacao
Thecc1EG025800 2.0kb downstream 2.0kb downstream 4780 true scaffold_5: 34764388-34769167 Theobroma cacao
Thecc1EG025800 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34764388-34766387 Theobroma cacao
Thecc1EG025800 5.0kb upstream 5.0kb upstream 7780 true scaffold_5: 34766388-34774167 Theobroma cacao
Thecc1EG025800 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34769168-34774167 Theobroma cacao
Thecc1EG025800 5.0kb downstream 5.0kb downstream 7780 true scaffold_5: 34761388-34769167 Theobroma cacao
Thecc1EG025800 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34761388-34766387 Theobroma cacao
Thecc1EG025800 10.0kb upstream 10.0kb upstream 12780 true scaffold_5: 34766388-34779167 Theobroma cacao
Thecc1EG025800 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34769168-34779167 Theobroma cacao
Thecc1EG025800 10.0kb downstream 10.0kb downstream 12780 true scaffold_5: 34756388-34769167 Theobroma cacao
Thecc1EG025800 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34756388-34766387 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838380 5264 Brassicales-Malvales View MSA
124343466 5266 SBM View MSA
124244385 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain