Gene : Pavir.9NG362900 P. virgatum v4.1
Defline:  (1 of 4) PTHR10694:SF33 - TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN Genomic Order:  3320
Name:  ? Pavir.9NG362900 Secondary Identifier:  ? PAC:37657824
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG362900 0.5kb upstream 0.5kb upstream 5881 true Chr09N: 52500944-52506824 Panicum virgatum
Pavir.9NG362900 0.5kb upstream 0.5kb upstream 500 false Chr09N: 52500944-52501443 Panicum virgatum
Pavir.9NG362900 0.5kb downstream 0.5kb downstream 5881 true Chr09N: 52501444-52507324 Panicum virgatum
Pavir.9NG362900 0.5kb downstream 0.5kb downstream 500 false Chr09N: 52506825-52507324 Panicum virgatum
Pavir.9NG362900 1.0kb upstream 1.0kb upstream 6381 true Chr09N: 52500444-52506824 Panicum virgatum
Pavir.9NG362900 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 52500444-52501443 Panicum virgatum
Pavir.9NG362900 1.0kb downstream 1.0kb downstream 6381 true Chr09N: 52501444-52507824 Panicum virgatum
Pavir.9NG362900 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 52506825-52507824 Panicum virgatum
Pavir.9NG362900 2.0kb upstream 2.0kb upstream 7381 true Chr09N: 52499444-52506824 Panicum virgatum
Pavir.9NG362900 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 52499444-52501443 Panicum virgatum
Pavir.9NG362900 2.0kb downstream 2.0kb downstream 7381 true Chr09N: 52501444-52508824 Panicum virgatum
Pavir.9NG362900 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 52506825-52508824 Panicum virgatum
Pavir.9NG362900 5.0kb upstream 5.0kb upstream 10381 true Chr09N: 52496444-52506824 Panicum virgatum
Pavir.9NG362900 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 52496444-52501443 Panicum virgatum
Pavir.9NG362900 5.0kb downstream 5.0kb downstream 10381 true Chr09N: 52501444-52511824 Panicum virgatum
Pavir.9NG362900 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 52506825-52511824 Panicum virgatum
Pavir.9NG362900 10.0kb upstream 10.0kb upstream 15381 true Chr09N: 52491444-52506824 Panicum virgatum
Pavir.9NG362900 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 52491444-52501443 Panicum virgatum
Pavir.9NG362900 10.0kb downstream 10.0kb downstream 15381 true Chr09N: 52501444-52516824 Panicum virgatum
Pavir.9NG362900 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 52506825-52516824 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182605 5267 Panicoideae View MSA
124577969 5269 Grass View MSA
122042889 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121310039 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain