Gene : Thecc1EG026109 T. cacao v1.1

Defline:  (1 of 1) K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Genomic Order:  2638
Name:  ? Thecc1EG026109 Secondary Identifier:  ? PAC:27422067

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026109 0.5kb upstream 0.5kb upstream 25313 true scaffold_5: 36568839-36594151 Theobroma cacao
Thecc1EG026109 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 36593652-36594151 Theobroma cacao
Thecc1EG026109 0.5kb downstream 0.5kb downstream 25313 true scaffold_5: 36568339-36593651 Theobroma cacao
Thecc1EG026109 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 36568339-36568838 Theobroma cacao
Thecc1EG026109 1.0kb upstream 1.0kb upstream 25813 true scaffold_5: 36568839-36594651 Theobroma cacao
Thecc1EG026109 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 36593652-36594651 Theobroma cacao
Thecc1EG026109 1.0kb downstream 1.0kb downstream 25813 true scaffold_5: 36567839-36593651 Theobroma cacao
Thecc1EG026109 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 36567839-36568838 Theobroma cacao
Thecc1EG026109 2.0kb upstream 2.0kb upstream 26813 true scaffold_5: 36568839-36595651 Theobroma cacao
Thecc1EG026109 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 36593652-36595651 Theobroma cacao
Thecc1EG026109 2.0kb downstream 2.0kb downstream 26813 true scaffold_5: 36566839-36593651 Theobroma cacao
Thecc1EG026109 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 36566839-36568838 Theobroma cacao
Thecc1EG026109 5.0kb upstream 5.0kb upstream 29813 true scaffold_5: 36568839-36598651 Theobroma cacao
Thecc1EG026109 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 36593652-36598651 Theobroma cacao
Thecc1EG026109 5.0kb downstream 5.0kb downstream 29813 true scaffold_5: 36563839-36593651 Theobroma cacao
Thecc1EG026109 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 36563839-36568838 Theobroma cacao
Thecc1EG026109 10.0kb upstream 10.0kb upstream 34813 true scaffold_5: 36568839-36603651 Theobroma cacao
Thecc1EG026109 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 36593652-36603651 Theobroma cacao
Thecc1EG026109 10.0kb downstream 10.0kb downstream 34813 true scaffold_5: 36558839-36593651 Theobroma cacao
Thecc1EG026109 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 36558839-36568838 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
123829275 5264 Brassicales-Malvales View MSA
124342049 5266 SBM View MSA
124242116 5268 Malvidae View MSA
124065928 5270 Rosid View MSA
123737090 5271 Pentapetalae View MSA
122792740 5272 Eudicot View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain