Gene : Pavir.9NG317300 P. virgatum v4.1
Defline:  (1 of 4) K08967 - 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (mtnD, mtnZ, ADI1) Genomic Order:  2926
Name:  ? Pavir.9NG317300 Secondary Identifier:  ? PAC:37658814
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-4361 Panicum virgatum pathologic  
Pvirgatum PWY-5389 Panicum virgatum pathologic  
Pvirgatum PWY-7270 Panicum virgatum pathologic  
Pvirgatum PWY-7528 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG317300 0.5kb upstream 0.5kb upstream 4778 true Chr09N: 34955225-34960002 Panicum virgatum
Pavir.9NG317300 0.5kb upstream 0.5kb upstream 500 false Chr09N: 34955225-34955724 Panicum virgatum
Pavir.9NG317300 0.5kb downstream 0.5kb downstream 4778 true Chr09N: 34955725-34960502 Panicum virgatum
Pavir.9NG317300 0.5kb downstream 0.5kb downstream 500 false Chr09N: 34960003-34960502 Panicum virgatum
Pavir.9NG317300 1.0kb upstream 1.0kb upstream 5278 true Chr09N: 34954725-34960002 Panicum virgatum
Pavir.9NG317300 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 34954725-34955724 Panicum virgatum
Pavir.9NG317300 1.0kb downstream 1.0kb downstream 5278 true Chr09N: 34955725-34961002 Panicum virgatum
Pavir.9NG317300 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 34960003-34961002 Panicum virgatum
Pavir.9NG317300 2.0kb upstream 2.0kb upstream 6278 true Chr09N: 34953725-34960002 Panicum virgatum
Pavir.9NG317300 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 34953725-34955724 Panicum virgatum
Pavir.9NG317300 2.0kb downstream 2.0kb downstream 6278 true Chr09N: 34955725-34962002 Panicum virgatum
Pavir.9NG317300 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 34960003-34962002 Panicum virgatum
Pavir.9NG317300 5.0kb upstream 5.0kb upstream 9278 true Chr09N: 34950725-34960002 Panicum virgatum
Pavir.9NG317300 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 34950725-34955724 Panicum virgatum
Pavir.9NG317300 5.0kb downstream 5.0kb downstream 9278 true Chr09N: 34955725-34965002 Panicum virgatum
Pavir.9NG317300 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 34960003-34965002 Panicum virgatum
Pavir.9NG317300 10.0kb upstream 10.0kb upstream 14278 true Chr09N: 34945725-34960002 Panicum virgatum
Pavir.9NG317300 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 34945725-34955724 Panicum virgatum
Pavir.9NG317300 10.0kb downstream 10.0kb downstream 14278 true Chr09N: 34955725-34970002 Panicum virgatum
Pavir.9NG317300 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 34960003-34970002 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179204 5267 Panicoideae View MSA
124465520 5269 Grass View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain