Gene : Pavir.9NG317000 P. virgatum v4.1
Defline:  (1 of 2) PTHR23418:SF4 - 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  2923
Name:  ? Pavir.9NG317000 Secondary Identifier:  ? PAC:37652284
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-4361 Panicum virgatum pathologic  
Pvirgatum PWY-7270 Panicum virgatum pathologic  
Pvirgatum PWY-7528 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG317000 0.5kb upstream 0.5kb upstream 2967 true Chr09N: 34920975-34923941 Panicum virgatum
Pavir.9NG317000 0.5kb upstream 0.5kb upstream 500 false Chr09N: 34920975-34921474 Panicum virgatum
Pavir.9NG317000 0.5kb downstream 0.5kb downstream 2967 true Chr09N: 34921475-34924441 Panicum virgatum
Pavir.9NG317000 0.5kb downstream 0.5kb downstream 500 false Chr09N: 34923942-34924441 Panicum virgatum
Pavir.9NG317000 1.0kb upstream 1.0kb upstream 3467 true Chr09N: 34920475-34923941 Panicum virgatum
Pavir.9NG317000 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 34920475-34921474 Panicum virgatum
Pavir.9NG317000 1.0kb downstream 1.0kb downstream 3467 true Chr09N: 34921475-34924941 Panicum virgatum
Pavir.9NG317000 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 34923942-34924941 Panicum virgatum
Pavir.9NG317000 2.0kb upstream 2.0kb upstream 4467 true Chr09N: 34919475-34923941 Panicum virgatum
Pavir.9NG317000 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 34919475-34921474 Panicum virgatum
Pavir.9NG317000 2.0kb downstream 2.0kb downstream 4467 true Chr09N: 34921475-34925941 Panicum virgatum
Pavir.9NG317000 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 34923942-34925941 Panicum virgatum
Pavir.9NG317000 5.0kb upstream 5.0kb upstream 7467 true Chr09N: 34916475-34923941 Panicum virgatum
Pavir.9NG317000 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 34916475-34921474 Panicum virgatum
Pavir.9NG317000 5.0kb downstream 5.0kb downstream 7467 true Chr09N: 34921475-34928941 Panicum virgatum
Pavir.9NG317000 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 34923942-34928941 Panicum virgatum
Pavir.9NG317000 10.0kb upstream 10.0kb upstream 12467 true Chr09N: 34911475-34923941 Panicum virgatum
Pavir.9NG317000 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 34911475-34921474 Panicum virgatum
Pavir.9NG317000 10.0kb downstream 10.0kb downstream 12467 true Chr09N: 34921475-34933941 Panicum virgatum
Pavir.9NG317000 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 34923942-34933941 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180959 5267 Panicoideae View MSA
124572378 5269 Grass View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain