Gene : Pavir.9NG384500 P. virgatum v4.1
Defline:  (1 of 2) 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Genomic Order:  3511
Name:  ? Pavir.9NG384500 Secondary Identifier:  ? PAC:37656996
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG384500 0.5kb upstream 0.5kb upstream 2787 true Chr09N: 57495645-57498431 Panicum virgatum
Pavir.9NG384500 0.5kb upstream 0.5kb upstream 500 false Chr09N: 57497932-57498431 Panicum virgatum
Pavir.9NG384500 0.5kb downstream 0.5kb downstream 2787 true Chr09N: 57495145-57497931 Panicum virgatum
Pavir.9NG384500 0.5kb downstream 0.5kb downstream 500 false Chr09N: 57495145-57495644 Panicum virgatum
Pavir.9NG384500 1.0kb upstream 1.0kb upstream 3287 true Chr09N: 57495645-57498931 Panicum virgatum
Pavir.9NG384500 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 57497932-57498931 Panicum virgatum
Pavir.9NG384500 1.0kb downstream 1.0kb downstream 3287 true Chr09N: 57494645-57497931 Panicum virgatum
Pavir.9NG384500 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 57494645-57495644 Panicum virgatum
Pavir.9NG384500 2.0kb upstream 2.0kb upstream 4287 true Chr09N: 57495645-57499931 Panicum virgatum
Pavir.9NG384500 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 57497932-57499931 Panicum virgatum
Pavir.9NG384500 2.0kb downstream 2.0kb downstream 4287 true Chr09N: 57493645-57497931 Panicum virgatum
Pavir.9NG384500 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 57493645-57495644 Panicum virgatum
Pavir.9NG384500 5.0kb upstream 5.0kb upstream 7287 true Chr09N: 57495645-57502931 Panicum virgatum
Pavir.9NG384500 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 57497932-57502931 Panicum virgatum
Pavir.9NG384500 5.0kb downstream 5.0kb downstream 7287 true Chr09N: 57490645-57497931 Panicum virgatum
Pavir.9NG384500 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 57490645-57495644 Panicum virgatum
Pavir.9NG384500 10.0kb upstream 10.0kb upstream 12287 true Chr09N: 57495645-57507931 Panicum virgatum
Pavir.9NG384500 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 57497932-57507931 Panicum virgatum
Pavir.9NG384500 10.0kb downstream 10.0kb downstream 12287 true Chr09N: 57485645-57497931 Panicum virgatum
Pavir.9NG384500 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 57485645-57495644 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183912 5267 Panicoideae View MSA
124569923 5269 Grass View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain