Gene : Pavir.9NG503300 P. virgatum v4.1
Defline:  (1 of 2) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  4586
Name:  ? Pavir.9NG503300 Secondary Identifier:  ? PAC:37657857
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-735 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG503300 0.5kb upstream 0.5kb upstream 2257 true Chr09N: 83011342-83013598 Panicum virgatum
Pavir.9NG503300 0.5kb upstream 0.5kb upstream 500 false Chr09N: 83011342-83011841 Panicum virgatum
Pavir.9NG503300 0.5kb downstream 0.5kb downstream 2257 true Chr09N: 83011842-83014098 Panicum virgatum
Pavir.9NG503300 0.5kb downstream 0.5kb downstream 500 false Chr09N: 83013599-83014098 Panicum virgatum
Pavir.9NG503300 1.0kb upstream 1.0kb upstream 2757 true Chr09N: 83010842-83013598 Panicum virgatum
Pavir.9NG503300 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 83010842-83011841 Panicum virgatum
Pavir.9NG503300 1.0kb downstream 1.0kb downstream 2757 true Chr09N: 83011842-83014598 Panicum virgatum
Pavir.9NG503300 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 83013599-83014598 Panicum virgatum
Pavir.9NG503300 2.0kb upstream 2.0kb upstream 3757 true Chr09N: 83009842-83013598 Panicum virgatum
Pavir.9NG503300 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 83009842-83011841 Panicum virgatum
Pavir.9NG503300 2.0kb downstream 2.0kb downstream 3757 true Chr09N: 83011842-83015598 Panicum virgatum
Pavir.9NG503300 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 83013599-83015598 Panicum virgatum
Pavir.9NG503300 5.0kb upstream 5.0kb upstream 6757 true Chr09N: 83006842-83013598 Panicum virgatum
Pavir.9NG503300 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 83006842-83011841 Panicum virgatum
Pavir.9NG503300 5.0kb downstream 5.0kb downstream 6757 true Chr09N: 83011842-83018598 Panicum virgatum
Pavir.9NG503300 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 83013599-83018598 Panicum virgatum
Pavir.9NG503300 10.0kb upstream 10.0kb upstream 11757 true Chr09N: 83001842-83013598 Panicum virgatum
Pavir.9NG503300 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 83001842-83011841 Panicum virgatum
Pavir.9NG503300 10.0kb downstream 10.0kb downstream 11757 true Chr09N: 83011842-83023598 Panicum virgatum
Pavir.9NG503300 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 83013599-83023598 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185163 5267 Panicoideae View MSA
124573645 5269 Grass View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain