Gene : Thecc1EG025970 T. cacao v1.1
Defline:  (1 of 3) PTHR10110//PTHR10110:SF117 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 1-RELATED Genomic Order:  2535
Name:  ? Thecc1EG025970 Secondary Identifier:  ? PAC:27423166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025970 0.5kb upstream 0.5kb upstream 5928 true scaffold_5: 35777473-35783400 Theobroma cacao
Thecc1EG025970 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35782901-35783400 Theobroma cacao
Thecc1EG025970 0.5kb downstream 0.5kb downstream 5928 true scaffold_5: 35776973-35782900 Theobroma cacao
Thecc1EG025970 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35776973-35777472 Theobroma cacao
Thecc1EG025970 1.0kb upstream 1.0kb upstream 6428 true scaffold_5: 35777473-35783900 Theobroma cacao
Thecc1EG025970 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35782901-35783900 Theobroma cacao
Thecc1EG025970 1.0kb downstream 1.0kb downstream 6428 true scaffold_5: 35776473-35782900 Theobroma cacao
Thecc1EG025970 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35776473-35777472 Theobroma cacao
Thecc1EG025970 2.0kb upstream 2.0kb upstream 7428 true scaffold_5: 35777473-35784900 Theobroma cacao
Thecc1EG025970 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35782901-35784900 Theobroma cacao
Thecc1EG025970 2.0kb downstream 2.0kb downstream 7428 true scaffold_5: 35775473-35782900 Theobroma cacao
Thecc1EG025970 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35775473-35777472 Theobroma cacao
Thecc1EG025970 5.0kb upstream 5.0kb upstream 10428 true scaffold_5: 35777473-35787900 Theobroma cacao
Thecc1EG025970 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35782901-35787900 Theobroma cacao
Thecc1EG025970 5.0kb downstream 5.0kb downstream 10428 true scaffold_5: 35772473-35782900 Theobroma cacao
Thecc1EG025970 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35772473-35777472 Theobroma cacao
Thecc1EG025970 10.0kb upstream 10.0kb upstream 15428 true scaffold_5: 35777473-35792900 Theobroma cacao
Thecc1EG025970 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35782901-35792900 Theobroma cacao
Thecc1EG025970 10.0kb downstream 10.0kb downstream 15428 true scaffold_5: 35767473-35782900 Theobroma cacao
Thecc1EG025970 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35767473-35777472 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831937 5264 Brassicales-Malvales View MSA
124342094 5266 SBM View MSA
124245985 5268 Malvidae View MSA
124071378 5270 Rosid View MSA
123745225 5271 Pentapetalae View MSA
122787432 5272 Eudicot View MSA
122047449 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain