Gene : Thecc1EG025968 T. cacao v1.1
Defline:  (1 of 1) PTHR10809//PTHR10809:SF45 - VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2534
Name:  ? Thecc1EG025968 Secondary Identifier:  ? PAC:27422692
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025968 0.5kb upstream 0.5kb upstream 5076 true scaffold_5: 35772184-35777259 Theobroma cacao
Thecc1EG025968 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35772184-35772683 Theobroma cacao
Thecc1EG025968 0.5kb downstream 0.5kb downstream 5076 true scaffold_5: 35772684-35777759 Theobroma cacao
Thecc1EG025968 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35777260-35777759 Theobroma cacao
Thecc1EG025968 1.0kb upstream 1.0kb upstream 5576 true scaffold_5: 35771684-35777259 Theobroma cacao
Thecc1EG025968 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35771684-35772683 Theobroma cacao
Thecc1EG025968 1.0kb downstream 1.0kb downstream 5576 true scaffold_5: 35772684-35778259 Theobroma cacao
Thecc1EG025968 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35777260-35778259 Theobroma cacao
Thecc1EG025968 2.0kb upstream 2.0kb upstream 6576 true scaffold_5: 35770684-35777259 Theobroma cacao
Thecc1EG025968 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35770684-35772683 Theobroma cacao
Thecc1EG025968 2.0kb downstream 2.0kb downstream 6576 true scaffold_5: 35772684-35779259 Theobroma cacao
Thecc1EG025968 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35777260-35779259 Theobroma cacao
Thecc1EG025968 5.0kb upstream 5.0kb upstream 9576 true scaffold_5: 35767684-35777259 Theobroma cacao
Thecc1EG025968 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35767684-35772683 Theobroma cacao
Thecc1EG025968 5.0kb downstream 5.0kb downstream 9576 true scaffold_5: 35772684-35782259 Theobroma cacao
Thecc1EG025968 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35777260-35782259 Theobroma cacao
Thecc1EG025968 10.0kb upstream 10.0kb upstream 14576 true scaffold_5: 35762684-35777259 Theobroma cacao
Thecc1EG025968 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35762684-35772683 Theobroma cacao
Thecc1EG025968 10.0kb downstream 10.0kb downstream 14576 true scaffold_5: 35772684-35787259 Theobroma cacao
Thecc1EG025968 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35777260-35787259 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829171 5264 Brassicales-Malvales View MSA
124345755 5266 SBM View MSA
124251569 5268 Malvidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain