Gene : Thecc1EG025953 T. cacao v1.1
Defline:  (1 of 1) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  2523
Name:  ? Thecc1EG025953 Secondary Identifier:  ? PAC:27424669
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025953 0.5kb upstream 0.5kb upstream 7621 true scaffold_5: 35673854-35681474 Theobroma cacao
Thecc1EG025953 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35673854-35674353 Theobroma cacao
Thecc1EG025953 0.5kb downstream 0.5kb downstream 7621 true scaffold_5: 35674354-35681974 Theobroma cacao
Thecc1EG025953 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35681475-35681974 Theobroma cacao
Thecc1EG025953 1.0kb upstream 1.0kb upstream 8121 true scaffold_5: 35673354-35681474 Theobroma cacao
Thecc1EG025953 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35673354-35674353 Theobroma cacao
Thecc1EG025953 1.0kb downstream 1.0kb downstream 8121 true scaffold_5: 35674354-35682474 Theobroma cacao
Thecc1EG025953 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35681475-35682474 Theobroma cacao
Thecc1EG025953 2.0kb upstream 2.0kb upstream 9121 true scaffold_5: 35672354-35681474 Theobroma cacao
Thecc1EG025953 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35672354-35674353 Theobroma cacao
Thecc1EG025953 2.0kb downstream 2.0kb downstream 9121 true scaffold_5: 35674354-35683474 Theobroma cacao
Thecc1EG025953 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35681475-35683474 Theobroma cacao
Thecc1EG025953 5.0kb upstream 5.0kb upstream 12121 true scaffold_5: 35669354-35681474 Theobroma cacao
Thecc1EG025953 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35669354-35674353 Theobroma cacao
Thecc1EG025953 5.0kb downstream 5.0kb downstream 12121 true scaffold_5: 35674354-35686474 Theobroma cacao
Thecc1EG025953 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35681475-35686474 Theobroma cacao
Thecc1EG025953 10.0kb upstream 10.0kb upstream 17121 true scaffold_5: 35664354-35681474 Theobroma cacao
Thecc1EG025953 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35664354-35674353 Theobroma cacao
Thecc1EG025953 10.0kb downstream 10.0kb downstream 17121 true scaffold_5: 35674354-35691474 Theobroma cacao
Thecc1EG025953 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35681475-35691474 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831341 5264 Brassicales-Malvales View MSA
124339325 5266 SBM View MSA
124240039 5268 Malvidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain