Gene : Pavir.9NG626100 P. virgatum v4.1
Defline:  (1 of 4) KOG0993 - Rab5 GTPase effector Rabaptin-5 Genomic Order:  6534
Name:  ? Pavir.9NG626100 Secondary Identifier:  ? PAC:37657987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG626100 0.5kb upstream 0.5kb upstream 6245 true Chr09N: 108785938-108792182 Panicum virgatum
Pavir.9NG626100 0.5kb upstream 0.5kb upstream 500 false Chr09N: 108791683-108792182 Panicum virgatum
Pavir.9NG626100 0.5kb downstream 0.5kb downstream 6245 true Chr09N: 108785438-108791682 Panicum virgatum
Pavir.9NG626100 0.5kb downstream 0.5kb downstream 500 false Chr09N: 108785438-108785937 Panicum virgatum
Pavir.9NG626100 1.0kb upstream 1.0kb upstream 6745 true Chr09N: 108785938-108792682 Panicum virgatum
Pavir.9NG626100 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 108791683-108792682 Panicum virgatum
Pavir.9NG626100 1.0kb downstream 1.0kb downstream 6745 true Chr09N: 108784938-108791682 Panicum virgatum
Pavir.9NG626100 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 108784938-108785937 Panicum virgatum
Pavir.9NG626100 2.0kb upstream 2.0kb upstream 7745 true Chr09N: 108785938-108793682 Panicum virgatum
Pavir.9NG626100 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 108791683-108793682 Panicum virgatum
Pavir.9NG626100 2.0kb downstream 2.0kb downstream 7745 true Chr09N: 108783938-108791682 Panicum virgatum
Pavir.9NG626100 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 108783938-108785937 Panicum virgatum
Pavir.9NG626100 5.0kb upstream 5.0kb upstream 10745 true Chr09N: 108785938-108796682 Panicum virgatum
Pavir.9NG626100 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 108791683-108796682 Panicum virgatum
Pavir.9NG626100 5.0kb downstream 5.0kb downstream 10745 true Chr09N: 108780938-108791682 Panicum virgatum
Pavir.9NG626100 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 108780938-108785937 Panicum virgatum
Pavir.9NG626100 10.0kb upstream 10.0kb upstream 15745 true Chr09N: 108785938-108801682 Panicum virgatum
Pavir.9NG626100 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 108791683-108801682 Panicum virgatum
Pavir.9NG626100 10.0kb downstream 10.0kb downstream 15745 true Chr09N: 108775938-108791682 Panicum virgatum
Pavir.9NG626100 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 108775938-108785937 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122101495 5267 Panicoideae Singleton cluster - no MSA
124587735 5269 Grass View MSA
122048617 5273 Angiosperm View MSA
121311040 5274 Embryophyte View MSA
123348394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain