Gene : Thecc1EG026310 T. cacao v1.1
Defline:  (1 of 8) PF01918 - Alba (Alba) Genomic Order:  2791
Name:  ? Thecc1EG026310 Secondary Identifier:  ? PAC:27420827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026310 0.5kb upstream 0.5kb upstream 2342 true scaffold_5: 37628230-37630571 Theobroma cacao
Thecc1EG026310 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37630072-37630571 Theobroma cacao
Thecc1EG026310 0.5kb downstream 0.5kb downstream 2342 true scaffold_5: 37627730-37630071 Theobroma cacao
Thecc1EG026310 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37627730-37628229 Theobroma cacao
Thecc1EG026310 1.0kb upstream 1.0kb upstream 2842 true scaffold_5: 37628230-37631071 Theobroma cacao
Thecc1EG026310 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37630072-37631071 Theobroma cacao
Thecc1EG026310 1.0kb downstream 1.0kb downstream 2842 true scaffold_5: 37627230-37630071 Theobroma cacao
Thecc1EG026310 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37627230-37628229 Theobroma cacao
Thecc1EG026310 2.0kb upstream 2.0kb upstream 3842 true scaffold_5: 37628230-37632071 Theobroma cacao
Thecc1EG026310 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37630072-37632071 Theobroma cacao
Thecc1EG026310 2.0kb downstream 2.0kb downstream 3842 true scaffold_5: 37626230-37630071 Theobroma cacao
Thecc1EG026310 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37626230-37628229 Theobroma cacao
Thecc1EG026310 5.0kb upstream 5.0kb upstream 6842 true scaffold_5: 37628230-37635071 Theobroma cacao
Thecc1EG026310 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37630072-37635071 Theobroma cacao
Thecc1EG026310 5.0kb downstream 5.0kb downstream 6842 true scaffold_5: 37623230-37630071 Theobroma cacao
Thecc1EG026310 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37623230-37628229 Theobroma cacao
Thecc1EG026310 10.0kb upstream 10.0kb upstream 11842 true scaffold_5: 37628230-37640071 Theobroma cacao
Thecc1EG026310 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37630072-37640071 Theobroma cacao
Thecc1EG026310 10.0kb downstream 10.0kb downstream 11842 true scaffold_5: 37618230-37630071 Theobroma cacao
Thecc1EG026310 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37618230-37628229 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838766 5264 Brassicales-Malvales View MSA
124322497 5266 SBM View MSA
124237451 5268 Malvidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain