Gene : Thecc1EG026265 T. cacao v1.1

Defline:  (1 of 10) PF04576 - Zein-binding (Zein-binding) Genomic Order:  2764
Name:  ? Thecc1EG026265 Secondary Identifier:  ? PAC:27423764

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026265 0.5kb upstream 0.5kb upstream 6523 true scaffold_5: 37404323-37410845 Theobroma cacao
Thecc1EG026265 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37410346-37410845 Theobroma cacao
Thecc1EG026265 0.5kb downstream 0.5kb downstream 6523 true scaffold_5: 37403823-37410345 Theobroma cacao
Thecc1EG026265 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37403823-37404322 Theobroma cacao
Thecc1EG026265 1.0kb upstream 1.0kb upstream 7023 true scaffold_5: 37404323-37411345 Theobroma cacao
Thecc1EG026265 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37410346-37411345 Theobroma cacao
Thecc1EG026265 1.0kb downstream 1.0kb downstream 7023 true scaffold_5: 37403323-37410345 Theobroma cacao
Thecc1EG026265 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37403323-37404322 Theobroma cacao
Thecc1EG026265 2.0kb upstream 2.0kb upstream 8023 true scaffold_5: 37404323-37412345 Theobroma cacao
Thecc1EG026265 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37410346-37412345 Theobroma cacao
Thecc1EG026265 2.0kb downstream 2.0kb downstream 8023 true scaffold_5: 37402323-37410345 Theobroma cacao
Thecc1EG026265 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37402323-37404322 Theobroma cacao
Thecc1EG026265 5.0kb upstream 5.0kb upstream 11023 true scaffold_5: 37404323-37415345 Theobroma cacao
Thecc1EG026265 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37410346-37415345 Theobroma cacao
Thecc1EG026265 5.0kb downstream 5.0kb downstream 11023 true scaffold_5: 37399323-37410345 Theobroma cacao
Thecc1EG026265 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37399323-37404322 Theobroma cacao
Thecc1EG026265 10.0kb upstream 10.0kb upstream 16023 true scaffold_5: 37404323-37420345 Theobroma cacao
Thecc1EG026265 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37410346-37420345 Theobroma cacao
Thecc1EG026265 10.0kb downstream 10.0kb downstream 16023 true scaffold_5: 37394323-37410345 Theobroma cacao
Thecc1EG026265 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37394323-37404322 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838989 5264 Brassicales-Malvales View MSA
124350144 5266 SBM View MSA
124251951 5268 Malvidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain