Gene : Pavir.9NG672400 P. virgatum v4.1
Defline:  (1 of 3) K01736 - chorismate synthase (aroC) Genomic Order:  6067
Name:  ? Pavir.9NG672400 Secondary Identifier:  ? PAC:37659128
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG672400 0.5kb upstream 0.5kb upstream 4637 true Chr09N: 101967458-101972094 Panicum virgatum
Pavir.9NG672400 0.5kb upstream 0.5kb upstream 500 false Chr09N: 101967458-101967957 Panicum virgatum
Pavir.9NG672400 0.5kb downstream 0.5kb downstream 4637 true Chr09N: 101967958-101972594 Panicum virgatum
Pavir.9NG672400 0.5kb downstream 0.5kb downstream 500 false Chr09N: 101972095-101972594 Panicum virgatum
Pavir.9NG672400 1.0kb upstream 1.0kb upstream 5137 true Chr09N: 101966958-101972094 Panicum virgatum
Pavir.9NG672400 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 101966958-101967957 Panicum virgatum
Pavir.9NG672400 1.0kb downstream 1.0kb downstream 5137 true Chr09N: 101967958-101973094 Panicum virgatum
Pavir.9NG672400 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 101972095-101973094 Panicum virgatum
Pavir.9NG672400 2.0kb upstream 2.0kb upstream 6137 true Chr09N: 101965958-101972094 Panicum virgatum
Pavir.9NG672400 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 101965958-101967957 Panicum virgatum
Pavir.9NG672400 2.0kb downstream 2.0kb downstream 6137 true Chr09N: 101967958-101974094 Panicum virgatum
Pavir.9NG672400 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 101972095-101974094 Panicum virgatum
Pavir.9NG672400 5.0kb upstream 5.0kb upstream 9137 true Chr09N: 101962958-101972094 Panicum virgatum
Pavir.9NG672400 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 101962958-101967957 Panicum virgatum
Pavir.9NG672400 5.0kb downstream 5.0kb downstream 9137 true Chr09N: 101967958-101977094 Panicum virgatum
Pavir.9NG672400 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 101972095-101977094 Panicum virgatum
Pavir.9NG672400 10.0kb upstream 10.0kb upstream 14137 true Chr09N: 101957958-101972094 Panicum virgatum
Pavir.9NG672400 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 101957958-101967957 Panicum virgatum
Pavir.9NG672400 10.0kb downstream 10.0kb downstream 14137 true Chr09N: 101967958-101982094 Panicum virgatum
Pavir.9NG672400 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 101972095-101982094 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122196469 5267 Panicoideae View MSA
124574152 5269 Grass View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain