Gene : Thecc1EG026272 T. cacao v1.1
Defline:  (1 of 57) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  2770
Name:  ? Thecc1EG026272 Secondary Identifier:  ? PAC:27424701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026272 0.5kb upstream 0.5kb upstream 3106 true scaffold_5: 37433744-37436849 Theobroma cacao
Thecc1EG026272 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37436350-37436849 Theobroma cacao
Thecc1EG026272 0.5kb downstream 0.5kb downstream 3106 true scaffold_5: 37433244-37436349 Theobroma cacao
Thecc1EG026272 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37433244-37433743 Theobroma cacao
Thecc1EG026272 1.0kb upstream 1.0kb upstream 3606 true scaffold_5: 37433744-37437349 Theobroma cacao
Thecc1EG026272 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37436350-37437349 Theobroma cacao
Thecc1EG026272 1.0kb downstream 1.0kb downstream 3606 true scaffold_5: 37432744-37436349 Theobroma cacao
Thecc1EG026272 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37432744-37433743 Theobroma cacao
Thecc1EG026272 2.0kb upstream 2.0kb upstream 4606 true scaffold_5: 37433744-37438349 Theobroma cacao
Thecc1EG026272 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37436350-37438349 Theobroma cacao
Thecc1EG026272 2.0kb downstream 2.0kb downstream 4606 true scaffold_5: 37431744-37436349 Theobroma cacao
Thecc1EG026272 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37431744-37433743 Theobroma cacao
Thecc1EG026272 5.0kb upstream 5.0kb upstream 7606 true scaffold_5: 37433744-37441349 Theobroma cacao
Thecc1EG026272 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37436350-37441349 Theobroma cacao
Thecc1EG026272 5.0kb downstream 5.0kb downstream 7606 true scaffold_5: 37428744-37436349 Theobroma cacao
Thecc1EG026272 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37428744-37433743 Theobroma cacao
Thecc1EG026272 10.0kb upstream 10.0kb upstream 12606 true scaffold_5: 37433744-37446349 Theobroma cacao
Thecc1EG026272 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37436350-37446349 Theobroma cacao
Thecc1EG026272 10.0kb downstream 10.0kb downstream 12606 true scaffold_5: 37423744-37436349 Theobroma cacao
Thecc1EG026272 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37423744-37433743 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824986 5264 Brassicales-Malvales View MSA
124349124 5266 SBM View MSA
124250423 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain