Gene : Thecc1EG026266 T. cacao v1.1
Defline:  (1 of 4) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  2765
Name:  ? Thecc1EG026266 Secondary Identifier:  ? PAC:27424798
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026266 0.5kb upstream 0.5kb upstream 4717 true scaffold_5: 37411360-37416076 Theobroma cacao
Thecc1EG026266 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37415577-37416076 Theobroma cacao
Thecc1EG026266 0.5kb downstream 0.5kb downstream 4717 true scaffold_5: 37410860-37415576 Theobroma cacao
Thecc1EG026266 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37410860-37411359 Theobroma cacao
Thecc1EG026266 1.0kb upstream 1.0kb upstream 5217 true scaffold_5: 37411360-37416576 Theobroma cacao
Thecc1EG026266 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37415577-37416576 Theobroma cacao
Thecc1EG026266 1.0kb downstream 1.0kb downstream 5217 true scaffold_5: 37410360-37415576 Theobroma cacao
Thecc1EG026266 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37410360-37411359 Theobroma cacao
Thecc1EG026266 2.0kb upstream 2.0kb upstream 6217 true scaffold_5: 37411360-37417576 Theobroma cacao
Thecc1EG026266 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37415577-37417576 Theobroma cacao
Thecc1EG026266 2.0kb downstream 2.0kb downstream 6217 true scaffold_5: 37409360-37415576 Theobroma cacao
Thecc1EG026266 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37409360-37411359 Theobroma cacao
Thecc1EG026266 5.0kb upstream 5.0kb upstream 9217 true scaffold_5: 37411360-37420576 Theobroma cacao
Thecc1EG026266 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37415577-37420576 Theobroma cacao
Thecc1EG026266 5.0kb downstream 5.0kb downstream 9217 true scaffold_5: 37406360-37415576 Theobroma cacao
Thecc1EG026266 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37406360-37411359 Theobroma cacao
Thecc1EG026266 10.0kb upstream 10.0kb upstream 14217 true scaffold_5: 37411360-37425576 Theobroma cacao
Thecc1EG026266 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37415577-37425576 Theobroma cacao
Thecc1EG026266 10.0kb downstream 10.0kb downstream 14217 true scaffold_5: 37401360-37415576 Theobroma cacao
Thecc1EG026266 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37401360-37411359 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836717 5264 Brassicales-Malvales View MSA
124346447 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain