Gene : Thecc1EG026249 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2748
Name:  ? Thecc1EG026249 Secondary Identifier:  ? PAC:27421454
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026249 0.5kb upstream 0.5kb upstream 3925 true scaffold_5: 37321497-37325421 Theobroma cacao
Thecc1EG026249 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37321497-37321996 Theobroma cacao
Thecc1EG026249 0.5kb downstream 0.5kb downstream 3925 true scaffold_5: 37321997-37325921 Theobroma cacao
Thecc1EG026249 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37325422-37325921 Theobroma cacao
Thecc1EG026249 1.0kb upstream 1.0kb upstream 4425 true scaffold_5: 37320997-37325421 Theobroma cacao
Thecc1EG026249 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37320997-37321996 Theobroma cacao
Thecc1EG026249 1.0kb downstream 1.0kb downstream 4425 true scaffold_5: 37321997-37326421 Theobroma cacao
Thecc1EG026249 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37325422-37326421 Theobroma cacao
Thecc1EG026249 2.0kb upstream 2.0kb upstream 5425 true scaffold_5: 37319997-37325421 Theobroma cacao
Thecc1EG026249 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37319997-37321996 Theobroma cacao
Thecc1EG026249 2.0kb downstream 2.0kb downstream 5425 true scaffold_5: 37321997-37327421 Theobroma cacao
Thecc1EG026249 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37325422-37327421 Theobroma cacao
Thecc1EG026249 5.0kb upstream 5.0kb upstream 8425 true scaffold_5: 37316997-37325421 Theobroma cacao
Thecc1EG026249 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37316997-37321996 Theobroma cacao
Thecc1EG026249 5.0kb downstream 5.0kb downstream 8425 true scaffold_5: 37321997-37330421 Theobroma cacao
Thecc1EG026249 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37325422-37330421 Theobroma cacao
Thecc1EG026249 10.0kb upstream 10.0kb upstream 13425 true scaffold_5: 37311997-37325421 Theobroma cacao
Thecc1EG026249 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37311997-37321996 Theobroma cacao
Thecc1EG026249 10.0kb downstream 10.0kb downstream 13425 true scaffold_5: 37321997-37335421 Theobroma cacao
Thecc1EG026249 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37325422-37335421 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826047 5264 Brassicales-Malvales View MSA
124320873 5266 SBM View MSA
124248396 5268 Malvidae View MSA
124069931 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain