Gene : Thecc1EG026153 T. cacao v1.1
Defline:  (1 of 2) PF03107//PF07649//PF17120 - C1 domain (C1_2) // C1-like domain (C1_3) // Zinc-ribbon, C4HC2 type (Zn_ribbon_17) Genomic Order:  2675
Name:  ? Thecc1EG026153 Secondary Identifier:  ? PAC:27422096
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026153 0.5kb upstream 0.5kb upstream 4809 true scaffold_5: 36837132-36841940 Theobroma cacao
Thecc1EG026153 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 36837132-36837631 Theobroma cacao
Thecc1EG026153 0.5kb downstream 0.5kb downstream 4809 true scaffold_5: 36837632-36842440 Theobroma cacao
Thecc1EG026153 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 36841941-36842440 Theobroma cacao
Thecc1EG026153 1.0kb upstream 1.0kb upstream 5309 true scaffold_5: 36836632-36841940 Theobroma cacao
Thecc1EG026153 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 36836632-36837631 Theobroma cacao
Thecc1EG026153 1.0kb downstream 1.0kb downstream 5309 true scaffold_5: 36837632-36842940 Theobroma cacao
Thecc1EG026153 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 36841941-36842940 Theobroma cacao
Thecc1EG026153 2.0kb upstream 2.0kb upstream 6309 true scaffold_5: 36835632-36841940 Theobroma cacao
Thecc1EG026153 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 36835632-36837631 Theobroma cacao
Thecc1EG026153 2.0kb downstream 2.0kb downstream 6309 true scaffold_5: 36837632-36843940 Theobroma cacao
Thecc1EG026153 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 36841941-36843940 Theobroma cacao
Thecc1EG026153 5.0kb upstream 5.0kb upstream 9309 true scaffold_5: 36832632-36841940 Theobroma cacao
Thecc1EG026153 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 36832632-36837631 Theobroma cacao
Thecc1EG026153 5.0kb downstream 5.0kb downstream 9309 true scaffold_5: 36837632-36846940 Theobroma cacao
Thecc1EG026153 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 36841941-36846940 Theobroma cacao
Thecc1EG026153 10.0kb upstream 10.0kb upstream 14309 true scaffold_5: 36827632-36841940 Theobroma cacao
Thecc1EG026153 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 36827632-36837631 Theobroma cacao
Thecc1EG026153 10.0kb downstream 10.0kb downstream 14309 true scaffold_5: 36837632-36851940 Theobroma cacao
Thecc1EG026153 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 36841941-36851940 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832693 5264 Brassicales-Malvales View MSA
124350505 5266 SBM View MSA
124245070 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain