Gene : Pavir.9NG826900 P. virgatum v4.1
Defline:  (1 of 2) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  6186
Name:  ? Pavir.9NG826900 Secondary Identifier:  ? PAC:37655071
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5173 Panicum virgatum pathologic  
Pvirgatum PWY-5464 Panicum virgatum pathologic  
Pvirgatum PYRUVDEHYD-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG826900 0.5kb upstream 0.5kb upstream 4748 true Chr09N: 103858836-103863583 Panicum virgatum
Pavir.9NG826900 0.5kb upstream 0.5kb upstream 500 false Chr09N: 103863084-103863583 Panicum virgatum
Pavir.9NG826900 0.5kb downstream 0.5kb downstream 4748 true Chr09N: 103858336-103863083 Panicum virgatum
Pavir.9NG826900 0.5kb downstream 0.5kb downstream 500 false Chr09N: 103858336-103858835 Panicum virgatum
Pavir.9NG826900 1.0kb upstream 1.0kb upstream 5248 true Chr09N: 103858836-103864083 Panicum virgatum
Pavir.9NG826900 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 103863084-103864083 Panicum virgatum
Pavir.9NG826900 1.0kb downstream 1.0kb downstream 5248 true Chr09N: 103857836-103863083 Panicum virgatum
Pavir.9NG826900 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 103857836-103858835 Panicum virgatum
Pavir.9NG826900 2.0kb upstream 2.0kb upstream 6248 true Chr09N: 103858836-103865083 Panicum virgatum
Pavir.9NG826900 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 103863084-103865083 Panicum virgatum
Pavir.9NG826900 2.0kb downstream 2.0kb downstream 6248 true Chr09N: 103856836-103863083 Panicum virgatum
Pavir.9NG826900 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 103856836-103858835 Panicum virgatum
Pavir.9NG826900 5.0kb upstream 5.0kb upstream 9248 true Chr09N: 103858836-103868083 Panicum virgatum
Pavir.9NG826900 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 103863084-103868083 Panicum virgatum
Pavir.9NG826900 5.0kb downstream 5.0kb downstream 9248 true Chr09N: 103853836-103863083 Panicum virgatum
Pavir.9NG826900 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 103853836-103858835 Panicum virgatum
Pavir.9NG826900 10.0kb upstream 10.0kb upstream 14248 true Chr09N: 103858836-103873083 Panicum virgatum
Pavir.9NG826900 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 103863084-103873083 Panicum virgatum
Pavir.9NG826900 10.0kb downstream 10.0kb downstream 14248 true Chr09N: 103848836-103863083 Panicum virgatum
Pavir.9NG826900 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 103848836-103858835 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181161 5267 Panicoideae View MSA
124579734 5269 Grass View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain