Gene : Pavir.6KG028200 P. virgatum v4.1
Defline:  (1 of 3) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  264
Name:  ? Pavir.6KG028200 Secondary Identifier:  ? PAC:37690911
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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG028200 0.5kb upstream 0.5kb upstream 4312 true Chr06K: 2758480-2762791 Panicum virgatum
Pavir.6KG028200 0.5kb upstream 0.5kb upstream 500 false Chr06K: 2762292-2762791 Panicum virgatum
Pavir.6KG028200 0.5kb downstream 0.5kb downstream 4312 true Chr06K: 2757980-2762291 Panicum virgatum
Pavir.6KG028200 0.5kb downstream 0.5kb downstream 500 false Chr06K: 2757980-2758479 Panicum virgatum
Pavir.6KG028200 1.0kb upstream 1.0kb upstream 4812 true Chr06K: 2758480-2763291 Panicum virgatum
Pavir.6KG028200 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 2762292-2763291 Panicum virgatum
Pavir.6KG028200 1.0kb downstream 1.0kb downstream 4812 true Chr06K: 2757480-2762291 Panicum virgatum
Pavir.6KG028200 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 2757480-2758479 Panicum virgatum
Pavir.6KG028200 2.0kb upstream 2.0kb upstream 5812 true Chr06K: 2758480-2764291 Panicum virgatum
Pavir.6KG028200 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 2762292-2764291 Panicum virgatum
Pavir.6KG028200 2.0kb downstream 2.0kb downstream 5812 true Chr06K: 2756480-2762291 Panicum virgatum
Pavir.6KG028200 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 2756480-2758479 Panicum virgatum
Pavir.6KG028200 5.0kb upstream 5.0kb upstream 8812 true Chr06K: 2758480-2767291 Panicum virgatum
Pavir.6KG028200 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 2762292-2767291 Panicum virgatum
Pavir.6KG028200 5.0kb downstream 5.0kb downstream 8812 true Chr06K: 2753480-2762291 Panicum virgatum
Pavir.6KG028200 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 2753480-2758479 Panicum virgatum
Pavir.6KG028200 10.0kb upstream 10.0kb upstream 13812 true Chr06K: 2758480-2772291 Panicum virgatum
Pavir.6KG028200 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 2762292-2772291 Panicum virgatum
Pavir.6KG028200 10.0kb downstream 10.0kb downstream 13812 true Chr06K: 2748480-2762291 Panicum virgatum
Pavir.6KG028200 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 2748480-2758479 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184126 5267 Panicoideae View MSA
124588818 5269 Grass View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain