Gene : Pavir.6KG025400 P. virgatum v4.1
Defline:  (1 of 2) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  238
Name:  ? Pavir.6KG025400 Secondary Identifier:  ? PAC:37695748
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5837 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG025400 0.5kb upstream 0.5kb upstream 3410 true Chr06K: 2608109-2611518 Panicum virgatum
Pavir.6KG025400 0.5kb upstream 0.5kb upstream 500 false Chr06K: 2611019-2611518 Panicum virgatum
Pavir.6KG025400 0.5kb downstream 0.5kb downstream 3410 true Chr06K: 2607609-2611018 Panicum virgatum
Pavir.6KG025400 0.5kb downstream 0.5kb downstream 500 false Chr06K: 2607609-2608108 Panicum virgatum
Pavir.6KG025400 1.0kb upstream 1.0kb upstream 3910 true Chr06K: 2608109-2612018 Panicum virgatum
Pavir.6KG025400 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 2611019-2612018 Panicum virgatum
Pavir.6KG025400 1.0kb downstream 1.0kb downstream 3910 true Chr06K: 2607109-2611018 Panicum virgatum
Pavir.6KG025400 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 2607109-2608108 Panicum virgatum
Pavir.6KG025400 2.0kb upstream 2.0kb upstream 4910 true Chr06K: 2608109-2613018 Panicum virgatum
Pavir.6KG025400 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 2611019-2613018 Panicum virgatum
Pavir.6KG025400 2.0kb downstream 2.0kb downstream 4910 true Chr06K: 2606109-2611018 Panicum virgatum
Pavir.6KG025400 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 2606109-2608108 Panicum virgatum
Pavir.6KG025400 5.0kb upstream 5.0kb upstream 7910 true Chr06K: 2608109-2616018 Panicum virgatum
Pavir.6KG025400 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 2611019-2616018 Panicum virgatum
Pavir.6KG025400 5.0kb downstream 5.0kb downstream 7910 true Chr06K: 2603109-2611018 Panicum virgatum
Pavir.6KG025400 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 2603109-2608108 Panicum virgatum
Pavir.6KG025400 10.0kb upstream 10.0kb upstream 12910 true Chr06K: 2608109-2621018 Panicum virgatum
Pavir.6KG025400 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 2611019-2621018 Panicum virgatum
Pavir.6KG025400 10.0kb downstream 10.0kb downstream 12910 true Chr06K: 2598109-2611018 Panicum virgatum
Pavir.6KG025400 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 2598109-2608108 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189110 5267 Panicoideae View MSA
124581265 5269 Grass View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain