Gene : Thecc1EG026466 T. cacao v1.1
Defline:  (1 of 2) K00261 - glutamate dehydrogenase (NAD(P)+) (GLUD1_2, gdhA) Genomic Order:  2928
Name:  ? Thecc1EG026466 Secondary Identifier:  ? PAC:27424305
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARGININE-SYN4-PWY Theobroma cacao pathologic  
Tcacao GLUDEG-I-PWY Theobroma cacao pathologic  
Tcacao GLUTAMATE-DEG1-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026466 0.5kb upstream 0.5kb upstream 6415 true scaffold_5: 38395357-38401771 Theobroma cacao
Thecc1EG026466 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38401272-38401771 Theobroma cacao
Thecc1EG026466 0.5kb downstream 0.5kb downstream 6415 true scaffold_5: 38394857-38401271 Theobroma cacao
Thecc1EG026466 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38394857-38395356 Theobroma cacao
Thecc1EG026466 1.0kb upstream 1.0kb upstream 6915 true scaffold_5: 38395357-38402271 Theobroma cacao
Thecc1EG026466 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38401272-38402271 Theobroma cacao
Thecc1EG026466 1.0kb downstream 1.0kb downstream 6915 true scaffold_5: 38394357-38401271 Theobroma cacao
Thecc1EG026466 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38394357-38395356 Theobroma cacao
Thecc1EG026466 2.0kb upstream 2.0kb upstream 7915 true scaffold_5: 38395357-38403271 Theobroma cacao
Thecc1EG026466 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38401272-38403271 Theobroma cacao
Thecc1EG026466 2.0kb downstream 2.0kb downstream 7915 true scaffold_5: 38393357-38401271 Theobroma cacao
Thecc1EG026466 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38393357-38395356 Theobroma cacao
Thecc1EG026466 5.0kb upstream 5.0kb upstream 10915 true scaffold_5: 38395357-38406271 Theobroma cacao
Thecc1EG026466 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38401272-38406271 Theobroma cacao
Thecc1EG026466 5.0kb downstream 5.0kb downstream 10915 true scaffold_5: 38390357-38401271 Theobroma cacao
Thecc1EG026466 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38390357-38395356 Theobroma cacao
Thecc1EG026466 10.0kb upstream 10.0kb upstream 15915 true scaffold_5: 38395357-38411271 Theobroma cacao
Thecc1EG026466 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38401272-38411271 Theobroma cacao
Thecc1EG026466 10.0kb downstream 10.0kb downstream 15915 true scaffold_5: 38385357-38401271 Theobroma cacao
Thecc1EG026466 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38385357-38395356 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840705 5264 Brassicales-Malvales View MSA
124341607 5266 SBM View MSA
124244105 5268 Malvidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain