Gene : Pavir.6KG058800 P. virgatum v4.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF37 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  535
Name:  ? Pavir.6KG058800 Secondary Identifier:  ? PAC:37690787
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5129 Panicum virgatum pathologic  
Pvirgatum PWY-6483 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG058800 0.5kb upstream 0.5kb upstream 9980 true Chr06K: 8269146-8279125 Panicum virgatum
Pavir.6KG058800 0.5kb upstream 0.5kb upstream 500 false Chr06K: 8269146-8269645 Panicum virgatum
Pavir.6KG058800 0.5kb downstream 0.5kb downstream 9980 true Chr06K: 8269646-8279625 Panicum virgatum
Pavir.6KG058800 0.5kb downstream 0.5kb downstream 500 false Chr06K: 8279126-8279625 Panicum virgatum
Pavir.6KG058800 1.0kb upstream 1.0kb upstream 10480 true Chr06K: 8268646-8279125 Panicum virgatum
Pavir.6KG058800 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 8268646-8269645 Panicum virgatum
Pavir.6KG058800 1.0kb downstream 1.0kb downstream 10480 true Chr06K: 8269646-8280125 Panicum virgatum
Pavir.6KG058800 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 8279126-8280125 Panicum virgatum
Pavir.6KG058800 2.0kb upstream 2.0kb upstream 11480 true Chr06K: 8267646-8279125 Panicum virgatum
Pavir.6KG058800 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 8267646-8269645 Panicum virgatum
Pavir.6KG058800 2.0kb downstream 2.0kb downstream 11480 true Chr06K: 8269646-8281125 Panicum virgatum
Pavir.6KG058800 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 8279126-8281125 Panicum virgatum
Pavir.6KG058800 5.0kb upstream 5.0kb upstream 14480 true Chr06K: 8264646-8279125 Panicum virgatum
Pavir.6KG058800 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 8264646-8269645 Panicum virgatum
Pavir.6KG058800 5.0kb downstream 5.0kb downstream 14480 true Chr06K: 8269646-8284125 Panicum virgatum
Pavir.6KG058800 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 8279126-8284125 Panicum virgatum
Pavir.6KG058800 10.0kb upstream 10.0kb upstream 19480 true Chr06K: 8259646-8279125 Panicum virgatum
Pavir.6KG058800 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 8259646-8269645 Panicum virgatum
Pavir.6KG058800 10.0kb downstream 10.0kb downstream 19480 true Chr06K: 8269646-8289125 Panicum virgatum
Pavir.6KG058800 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 8279126-8289125 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189104 5267 Panicoideae View MSA
124583970 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain