Gene : Thecc1EG026453 T. cacao v1.1
Defline:  (1 of 1) PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2915
Name:  ? Thecc1EG026453 Secondary Identifier:  ? PAC:27424501
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026453 0.5kb upstream 0.5kb upstream 5974 true scaffold_5: 38342241-38348214 Theobroma cacao
Thecc1EG026453 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38347715-38348214 Theobroma cacao
Thecc1EG026453 0.5kb downstream 0.5kb downstream 5974 true scaffold_5: 38341741-38347714 Theobroma cacao
Thecc1EG026453 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38341741-38342240 Theobroma cacao
Thecc1EG026453 1.0kb upstream 1.0kb upstream 6474 true scaffold_5: 38342241-38348714 Theobroma cacao
Thecc1EG026453 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38347715-38348714 Theobroma cacao
Thecc1EG026453 1.0kb downstream 1.0kb downstream 6474 true scaffold_5: 38341241-38347714 Theobroma cacao
Thecc1EG026453 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38341241-38342240 Theobroma cacao
Thecc1EG026453 2.0kb upstream 2.0kb upstream 7474 true scaffold_5: 38342241-38349714 Theobroma cacao
Thecc1EG026453 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38347715-38349714 Theobroma cacao
Thecc1EG026453 2.0kb downstream 2.0kb downstream 7474 true scaffold_5: 38340241-38347714 Theobroma cacao
Thecc1EG026453 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38340241-38342240 Theobroma cacao
Thecc1EG026453 5.0kb upstream 5.0kb upstream 10474 true scaffold_5: 38342241-38352714 Theobroma cacao
Thecc1EG026453 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38347715-38352714 Theobroma cacao
Thecc1EG026453 5.0kb downstream 5.0kb downstream 10474 true scaffold_5: 38337241-38347714 Theobroma cacao
Thecc1EG026453 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38337241-38342240 Theobroma cacao
Thecc1EG026453 10.0kb upstream 10.0kb upstream 15474 true scaffold_5: 38342241-38357714 Theobroma cacao
Thecc1EG026453 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38347715-38357714 Theobroma cacao
Thecc1EG026453 10.0kb downstream 10.0kb downstream 15474 true scaffold_5: 38332241-38347714 Theobroma cacao
Thecc1EG026453 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38332241-38342240 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819999 5264 Brassicales-Malvales Singleton cluster - no MSA
124316226 5266 SBM Singleton cluster - no MSA
124165066 5268 Malvidae Singleton cluster - no MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain