Gene : Pavir.6KG059800 P. virgatum v4.1
Defline:  (1 of 2) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Genomic Order:  544
Name:  ? Pavir.6KG059800 Secondary Identifier:  ? PAC:37694291
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG059800 0.5kb upstream 0.5kb upstream 5139 true Chr06K: 8425178-8430316 Panicum virgatum
Pavir.6KG059800 0.5kb upstream 0.5kb upstream 500 false Chr06K: 8425178-8425677 Panicum virgatum
Pavir.6KG059800 0.5kb downstream 0.5kb downstream 5139 true Chr06K: 8425678-8430816 Panicum virgatum
Pavir.6KG059800 0.5kb downstream 0.5kb downstream 500 false Chr06K: 8430317-8430816 Panicum virgatum
Pavir.6KG059800 1.0kb upstream 1.0kb upstream 5639 true Chr06K: 8424678-8430316 Panicum virgatum
Pavir.6KG059800 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 8424678-8425677 Panicum virgatum
Pavir.6KG059800 1.0kb downstream 1.0kb downstream 5639 true Chr06K: 8425678-8431316 Panicum virgatum
Pavir.6KG059800 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 8430317-8431316 Panicum virgatum
Pavir.6KG059800 2.0kb upstream 2.0kb upstream 6639 true Chr06K: 8423678-8430316 Panicum virgatum
Pavir.6KG059800 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 8423678-8425677 Panicum virgatum
Pavir.6KG059800 2.0kb downstream 2.0kb downstream 6639 true Chr06K: 8425678-8432316 Panicum virgatum
Pavir.6KG059800 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 8430317-8432316 Panicum virgatum
Pavir.6KG059800 5.0kb upstream 5.0kb upstream 9639 true Chr06K: 8420678-8430316 Panicum virgatum
Pavir.6KG059800 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 8420678-8425677 Panicum virgatum
Pavir.6KG059800 5.0kb downstream 5.0kb downstream 9639 true Chr06K: 8425678-8435316 Panicum virgatum
Pavir.6KG059800 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 8430317-8435316 Panicum virgatum
Pavir.6KG059800 10.0kb upstream 10.0kb upstream 14639 true Chr06K: 8415678-8430316 Panicum virgatum
Pavir.6KG059800 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 8415678-8425677 Panicum virgatum
Pavir.6KG059800 10.0kb downstream 10.0kb downstream 14639 true Chr06K: 8425678-8440316 Panicum virgatum
Pavir.6KG059800 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 8430317-8440316 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193782 5267 Panicoideae View MSA
124581049 5269 Grass View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain