Gene : Pavir.6KG055200 P. virgatum v4.1
Defline:  (1 of 4) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  505
Name:  ? Pavir.6KG055200 Secondary Identifier:  ? PAC:37690473
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum NONOXIPENT-PWY Panicum virgatum pathologic  
Pvirgatum PENTOSE-P-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5723 Panicum virgatum pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG055200 0.5kb upstream 0.5kb upstream 5453 true Chr06K: 7944203-7949655 Panicum virgatum
Pavir.6KG055200 0.5kb upstream 0.5kb upstream 500 false Chr06K: 7949156-7949655 Panicum virgatum
Pavir.6KG055200 0.5kb downstream 0.5kb downstream 5453 true Chr06K: 7943703-7949155 Panicum virgatum
Pavir.6KG055200 0.5kb downstream 0.5kb downstream 500 false Chr06K: 7943703-7944202 Panicum virgatum
Pavir.6KG055200 1.0kb upstream 1.0kb upstream 5953 true Chr06K: 7944203-7950155 Panicum virgatum
Pavir.6KG055200 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 7949156-7950155 Panicum virgatum
Pavir.6KG055200 1.0kb downstream 1.0kb downstream 5953 true Chr06K: 7943203-7949155 Panicum virgatum
Pavir.6KG055200 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 7943203-7944202 Panicum virgatum
Pavir.6KG055200 2.0kb upstream 2.0kb upstream 6953 true Chr06K: 7944203-7951155 Panicum virgatum
Pavir.6KG055200 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 7949156-7951155 Panicum virgatum
Pavir.6KG055200 2.0kb downstream 2.0kb downstream 6953 true Chr06K: 7942203-7949155 Panicum virgatum
Pavir.6KG055200 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 7942203-7944202 Panicum virgatum
Pavir.6KG055200 5.0kb upstream 5.0kb upstream 9953 true Chr06K: 7944203-7954155 Panicum virgatum
Pavir.6KG055200 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 7949156-7954155 Panicum virgatum
Pavir.6KG055200 5.0kb downstream 5.0kb downstream 9953 true Chr06K: 7939203-7949155 Panicum virgatum
Pavir.6KG055200 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 7939203-7944202 Panicum virgatum
Pavir.6KG055200 10.0kb upstream 10.0kb upstream 14953 true Chr06K: 7944203-7959155 Panicum virgatum
Pavir.6KG055200 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 7949156-7959155 Panicum virgatum
Pavir.6KG055200 10.0kb downstream 10.0kb downstream 14953 true Chr06K: 7934203-7949155 Panicum virgatum
Pavir.6KG055200 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 7934203-7944202 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175204 5267 Panicoideae View MSA
124569843 5269 Grass View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain