Gene : Thecc1EG026443 T. cacao v1.1

Defline:  (1 of 1) K14565 - nucleolar protein 58 (NOP58) Genomic Order:  2906
Name:  ? Thecc1EG026443 Secondary Identifier:  ? PAC:27424822

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026443 0.5kb upstream 0.5kb upstream 5032 true scaffold_5: 38278741-38283772 Theobroma cacao
Thecc1EG026443 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38278741-38279240 Theobroma cacao
Thecc1EG026443 0.5kb downstream 0.5kb downstream 5032 true scaffold_5: 38279241-38284272 Theobroma cacao
Thecc1EG026443 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38283773-38284272 Theobroma cacao
Thecc1EG026443 1.0kb upstream 1.0kb upstream 5532 true scaffold_5: 38278241-38283772 Theobroma cacao
Thecc1EG026443 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38278241-38279240 Theobroma cacao
Thecc1EG026443 1.0kb downstream 1.0kb downstream 5532 true scaffold_5: 38279241-38284772 Theobroma cacao
Thecc1EG026443 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38283773-38284772 Theobroma cacao
Thecc1EG026443 2.0kb upstream 2.0kb upstream 6532 true scaffold_5: 38277241-38283772 Theobroma cacao
Thecc1EG026443 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38277241-38279240 Theobroma cacao
Thecc1EG026443 2.0kb downstream 2.0kb downstream 6532 true scaffold_5: 38279241-38285772 Theobroma cacao
Thecc1EG026443 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38283773-38285772 Theobroma cacao
Thecc1EG026443 5.0kb upstream 5.0kb upstream 9532 true scaffold_5: 38274241-38283772 Theobroma cacao
Thecc1EG026443 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38274241-38279240 Theobroma cacao
Thecc1EG026443 5.0kb downstream 5.0kb downstream 9532 true scaffold_5: 38279241-38288772 Theobroma cacao
Thecc1EG026443 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38283773-38288772 Theobroma cacao
Thecc1EG026443 10.0kb upstream 10.0kb upstream 14532 true scaffold_5: 38269241-38283772 Theobroma cacao
Thecc1EG026443 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38269241-38279240 Theobroma cacao
Thecc1EG026443 10.0kb downstream 10.0kb downstream 14532 true scaffold_5: 38279241-38293772 Theobroma cacao
Thecc1EG026443 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38283773-38293772 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041003 5273 Angiosperm View MSA
123835230 5264 Brassicales-Malvales View MSA
124348847 5266 SBM View MSA
124242284 5268 Malvidae View MSA
124068125 5270 Rosid View MSA
123744603 5271 Pentapetalae View MSA
122786975 5272 Eudicot View MSA
121345420 5274 Embryophyte View MSA
123426153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain