Gene : Thecc1EG026407 T. cacao v1.1

Defline:  (1 of 3) K14007 - protein transport protein SEC24 (SEC24) Genomic Order:  2879
Name:  ? Thecc1EG026407 Secondary Identifier:  ? PAC:27422835

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026407 0.5kb upstream 0.5kb upstream 18818 true scaffold_5: 38112072-38130889 Theobroma cacao
Thecc1EG026407 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38130390-38130889 Theobroma cacao
Thecc1EG026407 0.5kb downstream 0.5kb downstream 18818 true scaffold_5: 38111572-38130389 Theobroma cacao
Thecc1EG026407 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38111572-38112071 Theobroma cacao
Thecc1EG026407 1.0kb upstream 1.0kb upstream 19318 true scaffold_5: 38112072-38131389 Theobroma cacao
Thecc1EG026407 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38130390-38131389 Theobroma cacao
Thecc1EG026407 1.0kb downstream 1.0kb downstream 19318 true scaffold_5: 38111072-38130389 Theobroma cacao
Thecc1EG026407 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38111072-38112071 Theobroma cacao
Thecc1EG026407 2.0kb upstream 2.0kb upstream 20318 true scaffold_5: 38112072-38132389 Theobroma cacao
Thecc1EG026407 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38130390-38132389 Theobroma cacao
Thecc1EG026407 2.0kb downstream 2.0kb downstream 20318 true scaffold_5: 38110072-38130389 Theobroma cacao
Thecc1EG026407 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38110072-38112071 Theobroma cacao
Thecc1EG026407 5.0kb upstream 5.0kb upstream 23318 true scaffold_5: 38112072-38135389 Theobroma cacao
Thecc1EG026407 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38130390-38135389 Theobroma cacao
Thecc1EG026407 5.0kb downstream 5.0kb downstream 23318 true scaffold_5: 38107072-38130389 Theobroma cacao
Thecc1EG026407 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38107072-38112071 Theobroma cacao
Thecc1EG026407 10.0kb upstream 10.0kb upstream 28318 true scaffold_5: 38112072-38140389 Theobroma cacao
Thecc1EG026407 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38130390-38140389 Theobroma cacao
Thecc1EG026407 10.0kb downstream 10.0kb downstream 28318 true scaffold_5: 38102072-38130389 Theobroma cacao
Thecc1EG026407 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38102072-38112071 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826263 5264 Brassicales-Malvales View MSA
124320961 5266 SBM View MSA
124168842 5268 Malvidae View MSA
123892105 5270 Rosid View MSA
123474327 5271 Pentapetalae View MSA
122509603 5272 Eudicot View MSA
122044519 5273 Angiosperm View MSA
121345636 5274 Embryophyte View MSA
123424318 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain