Gene : Thecc1EG026400 T. cacao v1.1

Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  2872
Name:  ? Thecc1EG026400 Secondary Identifier:  ? PAC:27421334

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026400 0.5kb upstream 0.5kb upstream 1998 true scaffold_5: 38076469-38078466 Theobroma cacao
Thecc1EG026400 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38077967-38078466 Theobroma cacao
Thecc1EG026400 0.5kb downstream 0.5kb downstream 1998 true scaffold_5: 38075969-38077966 Theobroma cacao
Thecc1EG026400 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38075969-38076468 Theobroma cacao
Thecc1EG026400 1.0kb upstream 1.0kb upstream 2498 true scaffold_5: 38076469-38078966 Theobroma cacao
Thecc1EG026400 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38077967-38078966 Theobroma cacao
Thecc1EG026400 1.0kb downstream 1.0kb downstream 2498 true scaffold_5: 38075469-38077966 Theobroma cacao
Thecc1EG026400 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38075469-38076468 Theobroma cacao
Thecc1EG026400 2.0kb upstream 2.0kb upstream 3498 true scaffold_5: 38076469-38079966 Theobroma cacao
Thecc1EG026400 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38077967-38079966 Theobroma cacao
Thecc1EG026400 2.0kb downstream 2.0kb downstream 3498 true scaffold_5: 38074469-38077966 Theobroma cacao
Thecc1EG026400 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38074469-38076468 Theobroma cacao
Thecc1EG026400 5.0kb upstream 5.0kb upstream 6498 true scaffold_5: 38076469-38082966 Theobroma cacao
Thecc1EG026400 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38077967-38082966 Theobroma cacao
Thecc1EG026400 5.0kb downstream 5.0kb downstream 6498 true scaffold_5: 38071469-38077966 Theobroma cacao
Thecc1EG026400 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38071469-38076468 Theobroma cacao
Thecc1EG026400 10.0kb upstream 10.0kb upstream 11498 true scaffold_5: 38076469-38087966 Theobroma cacao
Thecc1EG026400 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38077967-38087966 Theobroma cacao
Thecc1EG026400 10.0kb downstream 10.0kb downstream 11498 true scaffold_5: 38066469-38077966 Theobroma cacao
Thecc1EG026400 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38066469-38076468 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824909 5264 Brassicales-Malvales View MSA
124349047 5266 SBM View MSA
124247648 5268 Malvidae View MSA
124070209 5270 Rosid View MSA
123742913 5271 Pentapetalae View MSA
122794007 5272 Eudicot View MSA
122048864 5273 Angiosperm View MSA
121311144 5274 Embryophyte View MSA
123348481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain