Gene : Thecc1EG026399 T. cacao v1.1
Defline:  (1 of 1) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Genomic Order:  2871
Name:  ? Thecc1EG026399 Secondary Identifier:  ? PAC:27423827
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CALVIN-PWY Theobroma cacao pathologic  
Tcacao NONOXIPENT-PWY Theobroma cacao pathologic  
Tcacao PENTOSE-P-PWY Theobroma cacao pathologic  
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-5723 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026399 0.5kb upstream 0.5kb upstream 2081 true scaffold_5: 38073160-38075240 Theobroma cacao
Thecc1EG026399 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38074741-38075240 Theobroma cacao
Thecc1EG026399 0.5kb downstream 0.5kb downstream 2081 true scaffold_5: 38072660-38074740 Theobroma cacao
Thecc1EG026399 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38072660-38073159 Theobroma cacao
Thecc1EG026399 1.0kb upstream 1.0kb upstream 2581 true scaffold_5: 38073160-38075740 Theobroma cacao
Thecc1EG026399 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38074741-38075740 Theobroma cacao
Thecc1EG026399 1.0kb downstream 1.0kb downstream 2581 true scaffold_5: 38072160-38074740 Theobroma cacao
Thecc1EG026399 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38072160-38073159 Theobroma cacao
Thecc1EG026399 2.0kb upstream 2.0kb upstream 3581 true scaffold_5: 38073160-38076740 Theobroma cacao
Thecc1EG026399 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38074741-38076740 Theobroma cacao
Thecc1EG026399 2.0kb downstream 2.0kb downstream 3581 true scaffold_5: 38071160-38074740 Theobroma cacao
Thecc1EG026399 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38071160-38073159 Theobroma cacao
Thecc1EG026399 5.0kb upstream 5.0kb upstream 6581 true scaffold_5: 38073160-38079740 Theobroma cacao
Thecc1EG026399 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38074741-38079740 Theobroma cacao
Thecc1EG026399 5.0kb downstream 5.0kb downstream 6581 true scaffold_5: 38068160-38074740 Theobroma cacao
Thecc1EG026399 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38068160-38073159 Theobroma cacao
Thecc1EG026399 10.0kb upstream 10.0kb upstream 11581 true scaffold_5: 38073160-38084740 Theobroma cacao
Thecc1EG026399 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38074741-38084740 Theobroma cacao
Thecc1EG026399 10.0kb downstream 10.0kb downstream 11581 true scaffold_5: 38063160-38074740 Theobroma cacao
Thecc1EG026399 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38063160-38073159 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831184 5264 Brassicales-Malvales View MSA
124349311 5266 SBM View MSA
124244749 5268 Malvidae View MSA
124062390 5270 Rosid View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain