Gene : Thecc1EG026386 T. cacao v1.1
Defline:  (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase Genomic Order:  2859
Name:  ? Thecc1EG026386 Secondary Identifier:  ? PAC:27422580
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026386 0.5kb upstream 0.5kb upstream 7704 true scaffold_5: 38001967-38009670 Theobroma cacao
Thecc1EG026386 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38009171-38009670 Theobroma cacao
Thecc1EG026386 0.5kb downstream 0.5kb downstream 7704 true scaffold_5: 38001467-38009170 Theobroma cacao
Thecc1EG026386 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38001467-38001966 Theobroma cacao
Thecc1EG026386 1.0kb upstream 1.0kb upstream 8204 true scaffold_5: 38001967-38010170 Theobroma cacao
Thecc1EG026386 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38009171-38010170 Theobroma cacao
Thecc1EG026386 1.0kb downstream 1.0kb downstream 8204 true scaffold_5: 38000967-38009170 Theobroma cacao
Thecc1EG026386 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38000967-38001966 Theobroma cacao
Thecc1EG026386 2.0kb upstream 2.0kb upstream 9204 true scaffold_5: 38001967-38011170 Theobroma cacao
Thecc1EG026386 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38009171-38011170 Theobroma cacao
Thecc1EG026386 2.0kb downstream 2.0kb downstream 9204 true scaffold_5: 37999967-38009170 Theobroma cacao
Thecc1EG026386 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37999967-38001966 Theobroma cacao
Thecc1EG026386 5.0kb upstream 5.0kb upstream 12204 true scaffold_5: 38001967-38014170 Theobroma cacao
Thecc1EG026386 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38009171-38014170 Theobroma cacao
Thecc1EG026386 5.0kb downstream 5.0kb downstream 12204 true scaffold_5: 37996967-38009170 Theobroma cacao
Thecc1EG026386 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37996967-38001966 Theobroma cacao
Thecc1EG026386 10.0kb upstream 10.0kb upstream 17204 true scaffold_5: 38001967-38019170 Theobroma cacao
Thecc1EG026386 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38009171-38019170 Theobroma cacao
Thecc1EG026386 10.0kb downstream 10.0kb downstream 17204 true scaffold_5: 37991967-38009170 Theobroma cacao
Thecc1EG026386 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37991967-38001966 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041433 5273 Angiosperm View MSA
123827421 5264 Brassicales-Malvales View MSA
124342834 5266 SBM View MSA
124240245 5268 Malvidae View MSA
124065377 5270 Rosid View MSA
123738255 5271 Pentapetalae View MSA
122787643 5272 Eudicot View MSA
121347450 5274 Embryophyte View MSA
123427840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain