Gene : Thecc1EG026388 T. cacao v1.1
Defline:  (1 of 2) K02984 - small subunit ribosomal protein S3Ae (RP-S3Ae, RPS3A) Genomic Order:  2861
Name:  ? Thecc1EG026388 Secondary Identifier:  ? PAC:27425485
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026388 0.5kb upstream 0.5kb upstream 2563 true scaffold_5: 38013224-38015786 Theobroma cacao
Thecc1EG026388 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38013224-38013723 Theobroma cacao
Thecc1EG026388 0.5kb downstream 0.5kb downstream 2563 true scaffold_5: 38013724-38016286 Theobroma cacao
Thecc1EG026388 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38015787-38016286 Theobroma cacao
Thecc1EG026388 1.0kb upstream 1.0kb upstream 3063 true scaffold_5: 38012724-38015786 Theobroma cacao
Thecc1EG026388 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38012724-38013723 Theobroma cacao
Thecc1EG026388 1.0kb downstream 1.0kb downstream 3063 true scaffold_5: 38013724-38016786 Theobroma cacao
Thecc1EG026388 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38015787-38016786 Theobroma cacao
Thecc1EG026388 2.0kb upstream 2.0kb upstream 4063 true scaffold_5: 38011724-38015786 Theobroma cacao
Thecc1EG026388 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38011724-38013723 Theobroma cacao
Thecc1EG026388 2.0kb downstream 2.0kb downstream 4063 true scaffold_5: 38013724-38017786 Theobroma cacao
Thecc1EG026388 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38015787-38017786 Theobroma cacao
Thecc1EG026388 5.0kb upstream 5.0kb upstream 7063 true scaffold_5: 38008724-38015786 Theobroma cacao
Thecc1EG026388 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38008724-38013723 Theobroma cacao
Thecc1EG026388 5.0kb downstream 5.0kb downstream 7063 true scaffold_5: 38013724-38020786 Theobroma cacao
Thecc1EG026388 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38015787-38020786 Theobroma cacao
Thecc1EG026388 10.0kb upstream 10.0kb upstream 12063 true scaffold_5: 38003724-38015786 Theobroma cacao
Thecc1EG026388 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38003724-38013723 Theobroma cacao
Thecc1EG026388 10.0kb downstream 10.0kb downstream 12063 true scaffold_5: 38013724-38025786 Theobroma cacao
Thecc1EG026388 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38015787-38025786 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837466 5264 Brassicales-Malvales View MSA
124347427 5266 SBM View MSA
124244111 5268 Malvidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain